Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S6283.g18995.01.t

Possible name(s)

ATP5F1B; ATP6V1A; ATP6V1B2

Gene model

Phmamm.CG.MTP2014.S6283.g18995

Location

S6283 [253 / 2,990]

Sequences

Amino acid sequence

Length: 199

>Phmamm.CG.MTP2014.S6283.g18995.01.p
MNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY
QPTLATDMGTMQERITTTRKGSITSVQAIYVPADDLTDPSPATTFSHLDATTVLSRQVAE
LGFYPAVDPLESSSRIMDPNIVGLEHYDCARRVKKILQDQKSLQDIIAILGMGELSQEEK
LTVQRARKIQRFLSQPFQT

Nucleotide sequence

Length: 600

>Phmamm.CG.MTP2014.S6283.g18995.01.t
ATGAACGAGCCCCCAGGTGCTCGTGCCAGAGTTGCCCTCACTGGATTAACTGTTGCTGAA
TACTTCCGTGATGAAGAGGGACAGGATGTGCTGCTGTTTATTGACAACATTTTCAGATTT
ACACAAGCTGGTTCAGAGGTGTCTGCCTTGCTTGGACGTATTCCATCCGCTGTAGGTTAC
CAACCTACTCTTGCAACAGACATGGGAACTATGCAGGAGAGAATTACCACCACACGAAAA
GGATCCATTACATCTGTACAGGCTATTTATGTGCCTGCTGATGATTTAACTGATCCCAGC
CCTGCTACTACCTTCTCCCATTTGGATGCTACAACTGTGTTGTCTCGTCAAGTTGCTGAA
TTGGGTTTCTACCCTGCTGTGGACCCTCTCGAATCATCATCGCGTATCATGGACCCCAAC
ATCGTCGGACTTGAGCACTATGACTGTGCCAGAAGGGTGAAGAAAATCTTACAGGATCAA
AAATCACTGCAAGATATCATTGCTATCTTGGGAATGGGAGAATTGTCCCAAGAAGAAAAG
CTCACTGTCCAGAGGGCCAGGAAAATCCAGCGATTCCTTTCCCAGCCATTCCAGACGTAA

InterProScan

Pfam	ATPase_F1/V1/A1_a/bsu_nucl-bd (IPR000194) - T[1-134] 1.6E-41
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[1-139] 1.01E-46
ProSitePatterns	ATPase_a/bsu_AS (IPR020003) - T[125-134] .
Gene3D	ATPase_F1/V1_b/a_C (IPR024034) - T[137-199] 1.2E-27

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ATPB_HUMAN	90.909 %	371	1.45E-128
VATA_HUMAN	29.524 %	88.6	1.27E-20