- Transcript 'KH2012:KH.C6.158.v1....' >
- Transcript 'KH2012:KH.L153.31.v1...' >
- Transcript 'KH2012:KH.L18.20.v3....' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S6298.g18997.01.t
Possible name(s)
NLRC3; NLRP4; NOD2
Gene model
Location
S6298 [659 / 2,664]
Amino acid sequence
Length: 232
>Phmamm.CG.MTP2014.S6298.g18997.01.p
MDKLDLGNNPICDLGAAAMSKCLSNVKSLGLGSGRYADRGCGITSDGVSHITSGLLSLQE
PMQYLNLSYNKFGDDGAKKLSKCLQQVKELDLRKCGITSAGVKALACGLSTLQTPMQSLN
LTYNKVGDDGAKKLSKCLHQVKILDLSRCGITSTGVKALVGGLSTLQTPMQYLNLTSNKF
GDDGTKKLSKCLHKAKGLDLRRCGITSNGVTALVDGLSTLQTPLEFKVFIRI
Nucleotide sequence
Length: 699
>Phmamm.CG.MTP2014.S6298.g18997.01.t
ATGGATAAACTTGACCTGGGTAACAACCCAATCTGTGACCTTGGTGCTGCAGCAATGTCA
AAATGTTTGAGTAATGTCAAGTCACTTGGTTTGGGTAGTGGCAGATATGCTGATCGTGGT
TGTGGAATAACATCCGATGGAGTTTCTCATATCACTTCAGGTTTGCTGTCACTCCAAGAA
CCGATGCAATACTTGAACTTGTCATACAACAAGTTTGGTGATGATGGAGCAAAGAAGCTT
TCCAAATGTTTGCAACAAGTGAAGGAACTTGACTTGCGTAAATGTGGAATAACATCTGCT
GGAGTAAAAGCATTGGCTTGTGGATTGTCAACACTACAAACACCAATGCAGAGCTTAAAC
TTGACATACAACAAGGTTGGTGATGATGGGGCAAAGAAGCTTTCTAAATGTTTGCATCAA
GTGAAGATACTTGACTTGAGTAGATGTGGAATAACATCAACTGGAGTAAAAGCATTGGTT
GGTGGATTGTCAACACTGCAAACACCAATGCAATACTTGAACTTGACATCTAACAAGTTT
GGTGATGATGGGACAAAGAAGCTTTCCAAATGTTTACATAAAGCGAAGGGACTTGACTTG
CGTAGATGTGGGATCACATCCAATGGAGTAACAGCATTGGTTGATGGATTGTCAACACTA
CAAACACCATTGGAATTTAAAGTGTTCATAAGAATCTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[1-139] 9.5E-31 - T[140-225] 1.2E-15 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[62-81] 1.2E-4 - T[87-106] 0.0019 - T[116-135] 1.7E-4 - T[141-159] 0.0031 - T[170-189] 0.009 - T[198-213] 0.35 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[84-108] 49.0 - T[138-162] 35.0 - T[192-216] 99.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|