- Transcript 'KH2012:KH.C8.163.v4....' >
- Transcript 'KH2012:KH.L95.1.v1.A...' >
- Transcript 'Mooccu.CG.ELv1_2.S71...' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S631.g10737.01.t
Possible name(s)
TBR1; TBX6; TBXT
Gene model
Location
S631 [16,737 / 19,304]
Amino acid sequence
Length: 520
>Phmamm.CG.MTP2014.S631.g10737.01.p
MAYSEVQYPSQHCAVRPQQIQSDMQYYQGVPSRYQTVGKDESWYPNEDHNANSNFHHDNN
YQRLSPPCQAIPTMWNPINQGHYLNMNLFNDKNGQPVNNVNNYGQNGVYRQRINSAASDG
YGASSSNQWMTAQSPNLYSPTDQFNFPRSRQGSITEQGQLTPDNFYHTQQNYNNQCVPHH
MPYRTSSTPGSCGTNSPPNLPIIQSQPTTAQLPQPSQAQPGEVPIAGKRGSDWELECMGV
EMKLSNANVWKNFDNVVTEMVISKHGRRMFPVLEYELNGLDPNKLYNVFLDFVLANCYVW
KYVDQGWHPNGLAANEEPDFQPGQRVYLHPDSPAPGEVWNKKGASFNKMKLSNHYHEKEK
IITLRTLHKYQPRLHIVEVDQMNPSMQSNLRTFVLPKTTFMTVTLYHDTDVAQLKINLNP
FARSFRDKSLTKKPSDDSSSSNSSSMSQSLSPMTSPENVENSAHDVVDNELESYDANDIV
KVENSVSSTDLEKAKQFLHKQLNVMSQLVRTSEELERNSN
Nucleotide sequence
Length: 1,642
>Phmamm.CG.MTP2014.S631.g10737.01.t
GGCCATCACGTAAAGGAATTTTCAAAGGCTACTTATATTATAAGTTTTTTGACTTAAGTG
CTTATATTTAAGCCAGACTGTAATGGCTTATTCCGAAGTGCAGTACCCTTCGCAGCATTG
TGCTGTGAGACCTCAGCAGATACAGTCTGACATGCAATATTACCAAGGCGTGCCAAGTCG
ATATCAGACTGTAGGTAAAGACGAAAGCTGGTACCCTAACGAGGATCACAATGCTAACAG
CAATTTTCACCATGATAACAACTATCAGAGATTATCGCCTCCATGTCAAGCAATACCTAC
GATGTGGAATCCAATAAACCAGGGACACTACCTTAACATGAATCTGTTTAATGATAAGAA
CGGTCAACCTGTAAACAACGTAAACAACTACGGACAAAACGGCGTCTACCGTCAACGCAT
CAACAGCGCCGCCAGTGACGGGTATGGAGCATCTTCAAGCAACCAGTGGATGACAGCACA
AAGCCCAAATTTGTATTCCCCGACGGATCAGTTTAACTTTCCAAGATCTCGTCAAGGAAG
CATAACGGAACAGGGTCAGTTGACACCGGACAACTTTTACCACACCCAGCAAAATTATAA
TAACCAATGTGTACCGCACCATATGCCGTACAGAACTTCATCCACACCTGGTAGTTGTGG
TACTAACTCTCCTCCTAACCTGCCAATCATTCAATCTCAGCCCACAACAGCACAACTACC
ACAACCGTCACAGGCACAACCTGGAGAAGTTCCTATTGCAGGAAAGCGGGGCAGCGACTG
GGAATTGGAATGCATGGGAGTTGAAATGAAGCTGTCCAATGCAAATGTGTGGAAAAACTT
CGATAATGTGGTTACTGAGATGGTTATCAGCAAGCATGGCAGGCGAATGTTTCCTGTGTT
GGAATATGAACTGAACGGATTGGATCCAAACAAGCTCTACAACGTATTTCTGGACTTTGT
TCTTGCGAACTGCTATGTGTGGAAATATGTAGACCAAGGTTGGCATCCTAACGGACTTGC
TGCAAATGAAGAACCAGATTTTCAACCTGGGCAAAGAGTTTATTTACACCCCGACTCACC
CGCTCCCGGCGAGGTTTGGAATAAGAAAGGAGCAAGTTTCAATAAAATGAAGCTGAGCAA
CCATTATCACGAAAAAGAAAAGATTATTACACTACGAACTCTTCACAAGTATCAACCTCG
ACTTCACATAGTTGAGGTCGATCAAATGAACCCTTCCATGCAAAGCAATTTAAGAACGTT
TGTTCTTCCCAAAACTACTTTTATGACAGTAACCTTGTACCACGACACAGACGTTGCACA
ACTTAAAATCAACTTGAATCCATTTGCAAGGTCATTCAGAGACAAATCTTTGACCAAAAA
ACCATCAGATGATAGTAGCTCTTCAAACTCATCATCGATGTCGCAATCACTTTCCCCAAT
GACGTCACCAGAAAATGTGGAAAATTCTGCGCACGATGTAGTAGATAACGAACTTGAGAG
TTATGACGCAAATGATATCGTCAAAGTCGAGAATTCTGTTAGTTCAACCGACCTCGAAAA
AGCAAAGCAATTTCTCCACAAACAACTAAACGTCATGTCGCAATTAGTTCGAACGAGTGA
GGAGTTGGAAAGAAACTCCAAC
| PANTHER |
TF_T-box (IPR001699) - T[205-501] 5.3E-71 |
| Gene3D |
T-box_sf (IPR036960) - T[234-428] 7.8E-63 |
| SMART |
TF_T-box (IPR001699) - T[239-432] 1.6E-66 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[240-427] 1.99E-61 |
| Pfam |
TF_T-box (IPR001699) - T[243-427] 8.5E-59 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[244-427] 58.756 |
| PRINTS |
TF_T-box (IPR001699) - T[257-281] 1.1E-31 - T[327-340] 1.1E-31 - T[344-353] 1.1E-31 - T[363-377] 1.1E-31 - T[398-411] 1.1E-31 - T[419-427] 1.1E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BRAC_HUMAN | 38.288 % | 160 | 4.62E-44 |
| TBX6_HUMAN | 40.212 % | 166 | 4.9E-46 |
| TBR1_HUMAN | 42.273 % | 172 | 1.1E-46 |