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- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S631.g10737.02.t
Possible name(s)
TBR1; TBX6; TBXT
Gene model
Location
S631 [16,819 / 20,548]
Amino acid sequence
Length: 773
>Phmamm.CG.MTP2014.S631.g10737.02.p
MAYSEVQYPSQHCAVRPQQIQSDMQYYQGVPSRYQTVGKDESWYPNEDHNANSNFHHDNN
YQRLSPPCQAIPTMWNPINQGHYLNMNLFNDKNGQPVNNVNNYGQNGVYRQRINSAASDG
YGASSSNQWMTAQSPNLYSPTDQFNFPRSRQGSITEQGQLTPDNFYHTQQNYNNQCVPHH
MPYRTSSTPGSCGTNSPPNLPIIQSQPTTAQLPQPSQAQPGEVPIAGKRGSDWELECMGV
EMKLSNANVWKNFDNVVTEMVISKHGRRMFPVLEYELNGLDPNKLYNVFLDFVLANCYVW
KYVDQGWHPNGLAANEEPDFQPGQRVYLHPDSPAPGEVWNKKGASFNKMKLSNHYHEKEK
IITLRTLHKYQPRLHIVEVDQMNPSMQSNLRTFVLPKTTFMTVTLYHDTDVAQLKINLNP
FARSFRDKSLTKKPSDDSSSSNSSSMSQSLSPMTSPENVENSAHDVVDNELESYDANDIV
KVENSVSSTDLEKAKQFLHKQLNVMSQLVRTSEELERNSNSQSTGLVSNAQTTVPNKGAS
NPRETLEELLKPQTVHHFAPPSESKTANQEKQQTSPQTGNSLANYQLLNLDRCFPPNAVA
ASGVKLPFDPNKLIVARNETNPNLPAFYGCSYYREQAAAAAASRNVITQNKDTTDNSNKV
PVVFVPNSTNPTTQQITSERNHSVSSPQPSPVACFTSPNRQQPPQMTLPTLSPGCLRDIL
QSDEISDTFALSLKRKRCFDGINDDADDDVFSNSPPAFDFMQTQAKRSCFDAI
Nucleotide sequence
Length: 2,322
>Phmamm.CG.MTP2014.S631.g10737.02.t
ATGGCTTATTCCGAAGTGCAGTACCCTTCGCAGCATTGTGCTGTGAGACCTCAGCAGATA
CAGTCTGACATGCAATATTACCAAGGCGTGCCAAGTCGATATCAGACTGTAGGTAAAGAC
GAAAGCTGGTACCCTAACGAGGATCACAATGCTAACAGCAATTTTCACCATGATAACAAC
TATCAGAGATTATCGCCTCCATGTCAAGCAATACCTACGATGTGGAATCCAATAAACCAG
GGACACTACCTTAACATGAATCTGTTTAATGATAAGAACGGTCAACCTGTAAACAACGTA
AACAACTACGGACAAAACGGCGTCTACCGTCAACGCATCAACAGCGCCGCCAGTGACGGG
TATGGAGCATCTTCAAGCAACCAGTGGATGACAGCACAAAGCCCAAATTTGTATTCCCCG
ACGGATCAGTTTAACTTTCCAAGATCTCGTCAAGGAAGCATAACGGAACAGGGTCAGTTG
ACACCGGACAACTTTTACCACACCCAGCAAAATTATAATAACCAATGTGTACCGCACCAT
ATGCCGTACAGAACTTCATCCACACCTGGTAGTTGTGGTACTAACTCTCCTCCTAACCTG
CCAATCATTCAATCTCAGCCCACAACAGCACAACTACCACAACCGTCACAGGCACAACCT
GGAGAAGTTCCTATTGCAGGAAAGCGGGGCAGCGACTGGGAATTGGAATGCATGGGAGTT
GAAATGAAGCTGTCCAATGCAAATGTGTGGAAAAACTTCGATAATGTGGTTACTGAGATG
GTTATCAGCAAGCATGGCAGGCGAATGTTTCCTGTGTTGGAATATGAACTGAACGGATTG
GATCCAAACAAGCTCTACAACGTATTTCTGGACTTTGTTCTTGCGAACTGCTATGTGTGG
AAATATGTAGACCAAGGTTGGCATCCTAACGGACTTGCTGCAAATGAAGAACCAGATTTT
CAACCTGGGCAAAGAGTTTATTTACACCCCGACTCACCCGCTCCCGGCGAGGTTTGGAAT
AAGAAAGGAGCAAGTTTCAATAAAATGAAGCTGAGCAACCATTATCACGAAAAAGAAAAG
ATTATTACACTACGAACTCTTCACAAGTATCAACCTCGACTTCACATAGTTGAGGTCGAT
CAAATGAACCCTTCCATGCAAAGCAATTTAAGAACGTTTGTTCTTCCCAAAACTACTTTT
ATGACAGTAACCTTGTACCACGACACAGACGTTGCACAACTTAAAATCAACTTGAATCCA
TTTGCAAGGTCATTCAGAGACAAATCTTTGACCAAAAAACCATCAGATGATAGTAGCTCT
TCAAACTCATCATCGATGTCGCAATCACTTTCCCCAATGACGTCACCAGAAAATGTGGAA
AATTCTGCGCACGATGTAGTAGATAACGAACTTGAGAGTTATGACGCAAATGATATCGTC
AAAGTCGAGAATTCTGTTAGTTCAACCGACCTCGAAAAAGCAAAGCAATTTCTCCACAAA
CAACTAAACGTCATGTCGCAATTAGTTCGAACGAGTGAGGAGTTGGAAAGAAACTCCAAC
AGTCAAAGCACCGGTTTAGTATCTAATGCCCAAACGACAGTTCCCAATAAGGGTGCGTCC
AACCCAAGAGAAACACTAGAAGAACTGCTTAAACCTCAAACCGTTCATCATTTCGCCCCG
CCGTCAGAATCTAAAACTGCAAATCAGGAGAAGCAACAAACTTCGCCACAAACTGGCAAT
TCACTGGCAAATTATCAACTTCTTAATCTTGATCGCTGCTTTCCACCCAACGCTGTTGCA
GCTTCTGGGGTGAAACTCCCTTTTGATCCAAACAAATTAATTGTTGCTAGAAATGAAACA
AACCCAAATCTTCCTGCATTTTACGGATGTAGTTACTACAGGGAGCAAGCAGCAGCAGCA
GCTGCCTCACGCAACGTTATCACACAAAATAAAGACACTACTGACAATTCAAACAAAGTA
CCAGTGGTTTTCGTTCCAAACAGCACCAATCCCACAACGCAGCAGATCACTTCCGAAAGA
AATCATTCGGTCTCGTCACCACAGCCGTCACCAGTCGCGTGTTTTACGTCACCGAATCGA
CAGCAGCCTCCGCAGATGACCCTTCCCACTTTATCTCCGGGATGCCTTCGTGATATTCTT
CAGAGCGATGAGATTTCCGACACCTTTGCTCTCTCGCTAAAACGCAAGCGCTGCTTTGAC
GGCATCAATGATGACGCAGATGATGACGTTTTCAGTAACTCTCCACCAGCTTTTGATTTC
ATGCAAACGCAAGCGAAGAGAAGTTGTTTTGATGCAATTTAG
| PANTHER |
TF_T-box (IPR001699) - T[205-576] 1.7E-67 |
| Gene3D |
T-box_sf (IPR036960) - T[234-428] 1.7E-62 |
| SMART |
TF_T-box (IPR001699) - T[239-432] 1.6E-66 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[240-427] 4.22E-61 |
| Pfam |
TF_T-box (IPR001699) - T[243-427] 1.8E-58 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[244-427] 58.756 |
| PRINTS |
TF_T-box (IPR001699) - T[257-281] 9.7E-31 - T[327-340] 9.7E-31 - T[344-353] 9.7E-31 - T[363-377] 9.7E-31 - T[398-411] 9.7E-31 - T[419-427] 9.7E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BRAC_HUMAN | 39.706 % | 161 | 4.14E-43 |
| TBX6_HUMAN | 40.212 % | 167 | 5.24E-45 |
| TBR1_HUMAN | 42.273 % | 173 | 1.34E-45 |