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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.821.v1....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S657.g10984.01.t

Possible name(s)

RAB11A; RAB11B; RAB25

Gene model

Phmamm.CG.MTP2014.S657.g10984

Location

S657 [47,638 / 52,465]

Sequences

Amino acid sequence

Length: 208

>Phmamm.CG.MTP2014.S657.g10984.01.p
MGNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDAKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTGYYFCSTFHT
HEVHQLSNVYYERPVIFNKDRSQLCKVA

Nucleotide sequence

Length: 627

>Phmamm.CG.MTP2014.S657.g10984.01.t
ATGGGAAACAGGGATGATGAATATGACTATCTTTTTAAAGTTGTCCTAATTGGGGATTCT
GGAGTGGGAAAAAGTAATTTGTTGTCACGGTTTACAAGAAATGAGTTCAATTTAGAAAGT
AAAAGTACTATTGGGGTGGAGTTTGCCACCAGAAGTATTCAAGTTGATGCTAAGACCATA
AAAGCTCAGATTTGGGACACAGCTGGACAAGAACGATACAGGGCAATTACATCTGCGTAC
TACCGTGGTGCAGTAGGAGCATTGTTGGTGTATGACATCGCCAAGCACCTAACTTATGAA
AATGTGGAACGGTGGTTGAAAGAATTAAGAGATCATGCTGACAACAACATTGTAATTATG
TTAGTTGGGAACAAAAGTGATTTACGTCATCTCAGAGCTGTTCCTACCGATGAAGCCAAA
GCATTTTCAGAAAAGAATGGACTTTCATTTATTGAAACTTCTGCCCTTGATTCTACCAAT
GTTGAAGTCGCTTTTCAGAACATTCTCACAGGTTATTATTTTTGCAGCACTTTTCACACC
CATGAAGTTCACCAGTTAAGTAATGTCTATTATGAAAGACCTGTTATTTTCAACAAGGAC
AGAAGCCAATTGTGTAAAGTTGCATAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[7-176] 4.26E-58
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[10-168] 5.5E-45
Pfam
Small_GTPase (IPR001806) - T[13-170] 2.1E-61

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RB11A_HUMAN 80.374 % 340 1.88E-120
RB11B_HUMAN 94.22 % 334 2.5E-118
RAB25_HUMAN 70 % 251 1.17E-85