- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S65.g02323.01.t
Possible name(s)
GFI1; ZNF595; ZNF708
Gene model
Location
S65 [182,204 / 188,977]
Amino acid sequence
Length: 480
>Phmamm.CG.MTP2014.S65.g02323.01.p
MPVYTKSLIEANLITRNGFFNCEQKFCPIKSYCEVILEMMTPGKSQSVGYYYKEENTLNQ
SDPDYQQHVEETDGCQQRAMKYPCKDCDATFQYVTSLHQHEISEHSSKLQQRNNEAQKKN
AGLNDKRQFVCETCGRKFALSENLNRHKMIHNDSRPYHCTHCNKSFRLSQHLKEHIRIHT
GEKPYKCNICGHAFCQISNLKSHKKTHSKVKAFKCDECGKEFRRSFTLKQHKVAHERFND
VLPLAALQAPRNNAMKTFASSLSPPSDHASTGHKVTSQCNVTPDWRKHSDCRLTTNDHKF
SPVWEEFVRTCCPPVSKADDPDQQSWPEINEIARLAKRNNPAYDVTGDKTRDVTKLSAKS
KSETSFFVEQIIGRRDSTGSDKEATTSSDDAAGSDVSMSEQSPDYKWKRQLYKEWGSPSN
KRSRSPTSSPAHDVSTASPTGWSHDQWSHVVPLIEWKPVITGWRNVVDGRVYSAYRGFAV
Nucleotide sequence
Length: 3,559
>Phmamm.CG.MTP2014.S65.g02323.01.t
GTTTCAACGTTGCCACAGTGCAGATGTTACTGAGTTTGTATTCAGTGCTTATAGTTCTGA
AGTAACAGTTGTTGTGAAGGCAGCAATATCTGAATTAAAAACGAGAAACATCACAAATAC
AATAAAAGCTTATGGGGAAATATGCTGTAATGTAAAAACTGTCAGGCATGTGTGCTGCAA
AGGGTTTCCTTTTGAAGTTGTTTTTTAGCAAACCGCTTCAATCGCATTGTCCAGTGGCAG
TGTGCCCTCTAACTACCTAAACACTGACACACTCGAATGCCTGTTTATACTAAAAGTTTA
ATCGAAGCAAACCTTATTACACGAAATGGGTTTTTCAATTGTGAACAGAAATTTTGTCCC
ATAAAAAGCTATTGTGAAGTAATACTGGAAATGATGACGCCTGGAAAATCACAAAGCGTT
GGATATTATTACAAAGAAGAGAATACTTTAAACCAGAGTGACCCGGATTATCAACAGCAT
GTGGAAGAAACCGATGGGTGTCAGCAACGAGCAATGAAATACCCGTGCAAAGATTGTGAC
GCAACTTTTCAATATGTGACGTCACTACATCAGCATGAGATTTCCGAACATTCTTCCAAA
CTTCAACAACGAAACAATGAAGCGCAGAAAAAAAACGCAGGTTTAAACGACAAACGGCAA
TTTGTTTGTGAAACCTGCGGAAGGAAATTTGCTTTGTCAGAAAACCTGAATCGCCACAAG
ATGATTCACAACGATTCGCGCCCCTACCATTGCACGCATTGCAACAAAAGTTTTCGACTC
TCGCAACATTTGAAGGAACACATTCGAATCCACACAGGCGAGAAACCATACAAGTGCAAT
ATTTGTGGTCACGCATTTTGTCAAATCTCGAACCTGAAATCGCACAAGAAAACCCACAGC
AAGGTGAAAGCATTTAAGTGTGACGAGTGTGGGAAGGAATTTCGACGATCGTTCACCCTC
AAACAGCACAAGGTGGCGCACGAGAGGTTCAACGACGTATTACCACTGGCGGCGCTACAG
GCACCACGGAACAACGCAATGAAAACTTTCGCAAGCTCTTTGTCGCCACCTAGCGATCAT
GCCTCGACCGGGCACAAAGTGACGTCACAATGCAACGTGACTCCTGATTGGAGGAAACAT
AGCGACTGCAGACTAACCACAAACGACCACAAGTTCTCACCGGTCTGGGAGGAATTCGTG
CGCACGTGCTGCCCTCCAGTGTCCAAAGCTGATGATCCGGACCAGCAGAGTTGGCCGGAA
ATCAACGAGATTGCGCGACTCGCCAAACGTAACAATCCCGCCTATGACGTAACAGGCGAC
AAGACACGTGACGTCACAAAGCTATCGGCTAAATCGAAAAGCGAAACTTCGTTTTTCGTG
GAACAAATTATCGGGAGGCGTGATTCTACCGGTTCGGACAAAGAAGCGACGACAAGCTCG
GATGACGCAGCAGGAAGTGACGTATCTATGAGCGAACAATCGCCAGATTACAAATGGAAA
CGTCAACTCTACAAGGAGTGGGGAAGTCCCAGCAATAAACGGTCACGCAGCCCTACGTCA
TCACCAGCGCATGACGTCAGTACTGCGTCACCGACCGGATGGTCACATGACCAGTGGAGT
CACGTGGTCCCGCTGATTGAGTGGAAACCGGTTATAACAGGATGGAGGAATGTGGTAGAT
GGGAGGGTGTACTCCGCATATCGGGGTTTCGCCGTTTGATCCCCCTCACCCAGGGGGGTA
ATCCCCTCACCCAGCGGGGTAATCCCCCCCAGTCCAGTCCAATGTTCCGCTCAAAAACAC
GTTCTATGCCGCAAAAGTTTTCCCGCAACATTTCGCGTGGTTTTGTGATAATAAAGTTAC
TGTACTCGTGCGACACCTAGCGAGACAATTCCACTGAGAGTCGTGCCACAAGAGGGCGCA
CCACACCACGTGTAGAGTTTTATTTACGTGATAAAAAACGCGACACCGTGCAGACCCGGA
TATCCGGGCGTAAAAACGATTACATTGGTCTGTGGTTTGGAGGGAACACGATTATTACGT
AACAGAGGAAACGTTGTGATGCAAAATTGCTCAACTTGCAGAGCTCGAAATTAAAAGTCG
TTAACTTCGAGCCCTGCATTAACATCACAGCGTCAACAAAACGATTATCAGATTTTGACC
CCCACAAAGTTATTGAACTGTTGAGGAAATGATTGAGCTACTAACACCACAACTCATGTC
AGCCCCACATTTAGCTAAATTCTGATAGGTGGCGCGAAGAGATGAATTATTATTTCAGCA
GCTAAAGAGGTGGGGGAAATAAGTTTCAAAATTTTACATTGGGAAACAAGTCTTAGCATT
AGTTTCAAACTTTTAAACAAACGCCAAACCTTACCTTTGAACGACAGCAATTTACCCCTA
ACCCTAATAGCTGTCAGTATGTTTTGAGATATACCGCTTTAAATGAGTAAAATGCTCTCT
GGGCCACCTGTTGAAATTTAGTTAAATGTGTGACTGAGCCTGAGGTATGGTGTTGGTAGA
TTTTTCTAAGGAAATGGGACCCAACCCCAGGGACAGCACTAGGGTTACACAAAACCCATC
CAAACATGACCCACTGCTCCCAAACTGAAACAATAAACAGCATCGTCCACTTTTTTACCC
TGCTAAAATCTCCCCCTGGTTTCACATGTAAATGGGGTTAAAGGTCAAAGGGACATATTT
TGGTGTGATTGGTCACGCGTGGTACAGAAAGCAGTTTACCTAAGTTTTGCATCGCCATAA
ATAACAAAAATTAATGGGAGTACAACGAAAGTGCAAACATTACTGCCATTGTAAATGCTG
GACTCGGTTGCGATGCAGAATGTTCCGCACATCGTTGCAATACCTGAAACAAATATTTTG
TAAACAAGTCATCTCAAAAGTTGGGTAATTACTAAATGATTATCCATCCAAAACACAACA
GGTTTGCACAGCAATAAACCAGTGGTTCTCAATCTTTTACTGATCGCGTACCACCTGAAA
ACTTTTTCTATCCTAAACCCTGTTTAAATGATAAGTCCAAGAGTTTATTGACTACACTAG
CAAATTTATGAAACCAGCTTATCAATTCCAAATACATGTTTAAGACAAGGGTACAAAAAA
GGGCTGGTTAGTTGGATCACTTAAGCATCCCATCAACATACACACAAACAAATGTTACCT
TAATGCATCCAACATGGGCAAAACATTTAAAAGTGCCGTATCGAATGGATCAGCGAACCA
AGATCGAATTGGAACAGCATTTTCTATTGACAAACAAAGTGATTTGTGAGGTCACATATA
AATAGTATTTGACAGTGAGCTTACCAGGAAAACCTTTATATGCTCCCGGTGAATTATCCA
ATATTATGATGCTCGATAAATCAGCGTGGACAAACGACAAATCTTTTGTAAAACTTCCAG
TGTCTACTTTGCAATGCTGAAACAAAACGTGATGTAAGTACAGAATCTGCACAATAACAT
TACAAAAACATGCGCATGTTGACAAACAAACTATAAGCTCGCATAGAATTGAAAGTTAAA
TGTACAATCTTTACAGTTT
| SMART |
Znf_C2H2_type (IPR013087) - T[82-105] 0.22 - T[129-151] 0.012 - T[157-179] 0.0074 - T[185-207] 0.0058 - T[213-235] 0.0074 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[82-110] 9.827 - T[129-156] 14.191 - T[157-184] 16.81 - T[185-212] 13.152 - T[213-240] 11.967 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[84-105] . - T[131-151] . - T[159-179] . - T[187-207] . - T[215-235] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[127-179] 4.94E-14 - T[165-222] 8.13E-21 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[129-151] 9.7E-4 - T[157-179] 0.0063 - T[185-207] 5.9E-4 - T[213-234] 0.0012 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN708_HUMAN | 42.331 % | 125 | 2.56E-31 |
| ZN595_HUMAN | 42.331 % | 124 | 2.01E-30 |
| GFI1_HUMAN | 39.073 % | 122 | 1.13E-30 |