- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.L147.10.v2...' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S65.g02323.02.t
Possible name(s)
GFI1; ZNF595; ZNF708
Gene model
Location
S65 [184,044 / 188,587]
Amino acid sequence
Length: 475
>Phmamm.CG.MTP2014.S65.g02323.02.p
MMTPGKSQSVGYYYKEENTLNQSDPDYQQHVEETDGCQQRAMKYPCKDCDATFLYVTSLH
XKSQSVGYYYKEENTLNQSDPDYQQHVEETDGCQQRAMKYPCKDCDATFQYVTSLHQHEI
SEHSSKLQQRNNEAQKKNAGLNDKRQFVCETCGRKFALSENLNRHKMIHNDSRPYHCTHC
NKSFRLSQHLKEHIRIHTGEKPYKCNICGHAFCQISNLKSHKKTHSKVKAFKCDECGKEF
RRSFTLKQHKKTFASSLSPPSDHASTGHKVTSQCNVTPDWRKHSDCRLTTNDHKFSPVWE
EFVRTCCPPVSKADDPDQQSWPEINEIARLAKRNNPAYDVTGDKTRDVTKLSAKSKSETS
FFVEQIIGRRDSTGSDKEATTSSDDAAGSDVSMSEQSPDYKWKRQLYKEWGSPSNKRSRS
PTSSPAHDVSTASPTGWSHDQWSHVVPLIEWKPVITGWRNVVDGRVYSAYRGFAV
Nucleotide sequence
Length: 1,428
>Phmamm.CG.MTP2014.S65.g02323.02.t
ATGATGACGCCTGGAAAATCACAAAGCGTTGGATATTATTACAAAGAAGAGAATACTTTA
AACCAGAGTGACCCGGATTATCAACAGCATGTGGAAGAAACCGATGGGTGTCAGCAACGA
GCAATGAAATACCCGTGCAAAGATTGTGACGCAACTTTTCTATATGTGACGTCACTACAT
NGAAAATCGCAAAGCGTTGGATATTATTACAAAGAAGAGAATACTTTGAACCAGAGTGAC
CCGGATTATCAACAGCATGTGGAAGAAACCGATGGGTGTCAGCAACGAGCAATGAAATAC
CCGTGCAAAGATTGTGACGCAACTTTTCAATATGTGACGTCACTACATCAGCATGAGATT
TCCGAACATTCTTCCAAACTTCAACAACGAAACAATGAAGCGCAGAAAAAAAACGCAGGT
TTAAACGACAAACGGCAATTTGTTTGTGAAACCTGCGGAAGGAAATTTGCTTTGTCAGAA
AACCTGAATCGCCACAAGATGATTCACAACGATTCGCGCCCCTACCATTGCACGCATTGC
AACAAAAGTTTTCGACTCTCGCAACATTTGAAGGAACACATTCGAATCCACACAGGCGAG
AAACCATACAAGTGCAATATTTGTGGTCACGCATTTTGTCAAATCTCGAACCTGAAATCG
CACAAGAAAACCCACAGCAAGGTGAAAGCATTTAAGTGTGACGAGTGTGGGAAGGAATTT
CGACGATCGTTCACCCTCAAACAGCACAAGAAAACTTTCGCAAGCTCTTTGTCGCCACCT
AGCGATCATGCCTCGACCGGGCACAAAGTGACGTCACAATGCAACGTGACTCCTGATTGG
AGGAAACATAGCGACTGCAGACTAACCACAAACGACCACAAGTTCTCACCGGTCTGGGAG
GAATTCGTGCGCACGTGCTGCCCTCCAGTGTCCAAAGCTGATGATCCGGACCAGCAGAGT
TGGCCGGAAATCAACGAGATTGCGCGACTCGCCAAACGTAACAATCCCGCCTATGACGTA
ACAGGCGACAAGACACGTGACGTCACAAAGCTATCGGCTAAATCGAAAAGCGAAACTTCG
TTTTTCGTGGAACAAATTATCGGGAGGCGTGATTCTACCGGTTCGGACAAAGAAGCGACG
ACAAGCTCGGATGACGCAGCAGGAAGTGACGTATCTATGAGCGAACAATCGCCAGATTAC
AAATGGAAACGTCAACTCTACAAGGAGTGGGGAAGTCCCAGCAATAAACGGTCACGCAGC
CCTACGTCATCACCAGCGCATGACGTCAGTACTGCGTCACCGACCGGATGGTCACATGAC
CAGTGGAGTCACGTGGTCCCGCTGATTGAGTGGAAACCGGTTATAACAGGATGGAGGAAT
GTGGTAGATGGGAGGGTGTACTCCGCATATCGGGGTTTCGCCGTTTGA
| SMART |
Znf_C2H2_type (IPR013087) - T[100-123] 0.22 - T[147-169] 0.012 - T[175-197] 0.0074 - T[203-225] 0.0058 - T[231-251] 9.9 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[100-128] 9.827 - T[147-174] 14.191 - T[175-202] 16.81 - T[203-230] 13.152 - T[231-259] 11.78 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[102-123] . - T[149-169] . - T[177-197] . - T[205-225] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[145-197] 4.94E-14 - T[183-240] 8.27E-21 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[147-169] 9.6E-4 - T[175-197] 0.0063 - T[203-225] 5.8E-4 - T[231-252] 8.6E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN595_HUMAN | 37.443 % | 125 | 9.41E-31 |
| GFI1_HUMAN | 39.216 % | 124 | 3.04E-31 |
| ZN273_HUMAN | 34.222 % | 123 | 2.6E-30 |