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TRANSCRIPT CARD

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  1. EST 'FF882195.1' > 
  2. Clone 'cign036p18' > 
  3. Clone 'cien194249' > 
  4. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S65.g02327.02.t

Possible name(s)

CALM1; TNNC1; TNNC2

Gene model

Phmamm.CG.MTP2014.S65.g02327

Location

S65 [197,017 / 197,593]

Sequences

Amino acid sequence

Length: 191

>Phmamm.CG.MTP2014.S65.g02327.02.p
MGNFMYYQLQPETISYHRQQDYNALGQRKTDVVKDENEIDLLHRTYCADIFSQRKHINEK
RKLLTDVSDEAYGKRFPQWEAEDIGDFKIQFEIFDLNRDGLIDYKEMNMVLDEFGETSNE
EDRMKYFREIDLDGSNTVDFEEFLLVLNKLQQAATAGKAGGSIGNIIAKGAHQVKNLRRM
SVYKQLTNGLF

Nucleotide sequence

Length: 576

>Phmamm.CG.MTP2014.S65.g02327.02.t
ATGGGCAACTTTATGTATTACCAGCTCCAGCCTGAAACTATTAGTTATCACAGACAACAA
GATTACAACGCACTGGGCCAGCGCAAAACCGACGTTGTCAAGGATGAGAATGAAATAGAT
TTGCTGCACAGAACCTACTGCGCCGACATATTCTCCCAGCGAAAGCACATCAACGAGAAA
CGAAAACTTTTAACCGACGTTTCCGACGAAGCCTACGGAAAACGATTTCCTCAGTGGGAG
GCAGAAGATATCGGAGATTTTAAAATCCAGTTTGAAATTTTCGATTTAAACCGGGACGGC
TTGATCGACTATAAGGAAATGAATATGGTTCTGGACGAATTCGGTGAGACGAGCAACGAG
GAAGACCGGATGAAATATTTCCGGGAAATCGATCTTGACGGATCAAATACTGTGGATTTC
GAGGAATTTCTTCTGGTACTGAATAAATTGCAACAAGCAGCAACTGCGGGCAAAGCTGGT
GGAAGTATTGGTAATATTATAGCAAAAGGAGCTCATCAAGTGAAAAACCTACGTAGAATG
TCTGTTTACAAACAATTGACAAATGGATTGTTTTGA

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[74-152] 8.61E-16
ProSiteProfiles
EF_hand_dom (IPR002048) - T[82-117] 11.891 - T[118-153] 12.561
SMART
EF_hand_dom (IPR002048) - T[86-114] 2.5 - T[122-150] 0.059
Pfam
EF_hand_dom (IPR002048) - T[89-144] 5.0E-7
CDD
EF_hand_dom (IPR002048) - T[91-144] 2.03219E-13
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[95-107] . - T[131-143] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value