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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S663.g11042.01.t

Possible name(s)

RPL32

Location

S663 [43,372 / 46,665]

Sequences

Amino acid sequence

Length: 148

>Phmamm.CG.MTP2014.S663.g11042.01.p
FFSLRSPACKGNMAPRPLNGKKIVKKRVKKFIRHQSDRYKKLATNWRKPKGIDSRVRRRF
KGQYLMPSIGYGSDKKTRHCLRDHRGFKKLLVHNIRDLEVLMMSNRTFAAEIAHGVSSRK
RKVIVQRANELNIYVTNPNARLRSEENE

Nucleotide sequence

Length: 2,062

>Phmamm.CG.MTP2014.S663.g11042.01.t
ATTCTTTTCTCTGAGGTCTCCAGCGTGCAAAGGCAACATGGCACCTCGTCCACTTAATGG
AAAGAAGATCGTCAAGAAGCGGGTGAAGAAATTTATCCGTCATCAATCTGACAGATACAA
GAAGCTTGCAACCAACTGGAGGAAACCCAAAGGTATTGACAGCAGAGTTCGAAGAAGGTT
CAAGGGCCAATACTTGATGCCAAGTATTGGTTATGGAAGTGACAAGAAAACTCGACACTG
CTTGAGAGATCATCGTGGCTTCAAAAAACTCCTGGTTCACAACATTAGGGATTTGGAGGT
CTTAATGATGTCGAATCGCACATTCGCAGCAGAGATTGCACATGGTGTGTCCAGCAGAAA
GCGAAAAGTGATTGTACAGCGTGCTAACGAACTTAATATCTACGTTACCAACCCTAATGC
AAGGCTTCGCAGCGAGGAGAATGAATAAGCATTTGTTTGCTTGTTGCCAATAAAAGAAAA
ACACAATCATTTTTGTTTACTGGAATGAAACAAAGGCAAATTTAACAAGGTTTAAATGTA
ACAAACCAGACTTAGAAAGCAAAATCAACAAGTCCAAGTCGTTCCAATGATTCTGAACCT
AAAATAGTTTTTGGCTTGATGCAAATAAACCTGAAAACTCATGTCCCCCTGCTTGGTACA
CAAGTGTCCATACTCATCGCAGTTTCAATATCGTCATATAAATAGACAACTGAAGTAGGT
GAAGAATGTACAGCCGCCTTTCAGGATGACACTAACTTGGAAAAGATATTGGCAGCATAC
ATCAAATTCTGTGCATTACTAAGAAACAAGGCCAAAGGTTTGCTTAACACTAGAATGCTG
TTTTTTGACACTTCAGTGTGTTGAAATTTTTACAAGTCTCTTGTTGTGGGTCTGCCATGG
CTAGTGGCCTCCTGAAGGGGGCATTGACCCAATTGAGAATCACTGAGCTAAACTTTGTAG
TTAACACTTAGATTAGAATGTGCAAGTTAGCCAGGTTTTGGACACTAAGCAAAGTTTACA
TGTATTTACAGAAGTGTAAAGTTAAGTTGACCATTGAAAGAGTTTGGCAAATGACTACCT
TCCACGGTTTTCAGAAACAAAAGTTTGTTGAAAGGTAAAAAGAGACTCTACACACAACTT
CATAACATTCAACTTATCACACAATCAAAGTAATAAACAGCAGTTTGCAGCAAACTGAAT
GATCATGTTTGGGTGACTTTGTACAGTCGAGAATCAGTGGTGCTATTCTCTCACTGTAAT
TTATCTAGGAGACTGGAACGTTTTTTAACTTTGTAATATGGTCCAAGCCCTTAATAGACA
GCTCGCGGAGTGTATCCATGGCTGCTACAGTAATGTCTTCGGCATCTTGATCACTTAGCC
ATGACGCCATGTACATGTCCTTTTCCACAGGATCTTTGATGCATTTCCAAGTTTCATACA
GGGCACCACTACTTAAAACTAAACACAAATACTTTGTTATAATAGTGACTTCCAATAAGT
TTAGATATCCCCCCCCCCGTACATGTCCTTTTCCACAGGATCTTTGATGCATTTCCAAGT
TTCATAAAGGGCACCACTACTTAAAACTAAACACAAATACTTTGTTATAATAGTGGCTTC
TAATAAGTTTAGATAGGAACTAAAAGATAAGTTTTCACAAAATGTAAGCAGTTTATATGA
TGTAACCATGCAAGCAATCTATTTGAATAAAATACTGATGATGCCTATAACTTAGGTGAA
ATATATATATATCTAAACATAAAAAAACAGTGGATGACTTCAGACTTGTCAAAGTTTTCA
GTCAGTTCGTATGATAGACTATATTATCTGGACAACTTTAACACAGGACCTACTTTCCAA
GCATCTTCGAAACAACCACTCTGGCTCAATAGTGGTGGAGGCATATTTGTCTTCACCGTG
AGCAAGCTGAAACTCAATGCTCTTTCTTGCACATGGAATTAACACCATCATTTGCCAAAG
TGAGAACTTTTTCCACTTTTCTTGCATGGTTAACATAATGAAAAGCCTTAATATCAACAC
ATCTCCATGACATGATGGGTCC

InterProScan

SUPERFAMILY
Ribosomal_L32e_sf (IPR036351) - T[14-147] 3.66E-55
PANTHER
Ribosomal_L32e (IPR001515) - T[15-148] 9.5E-63
SMART
Ribosomal_L32e (IPR001515) - T[28-137] 1.8E-67
Pfam
Ribosomal_L32e (IPR001515) - T[29-137] 1.9E-48
CDD
Ribosomal_L32e (IPR001515) - T[31-137] 1.23746E-58
ProSitePatterns
Ribosomal_L32e_CS (IPR018263) - T[31-51] .
ProDom
Ribosomal_L32e (IPR001515) - T[34-138] 7.0E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL32_HUMAN 70.37 % 191 7.94E-64