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  1. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S666.g11068.01.t

Possible name(s)

IPO13; TNPO3

Location

S666 [6,401 / 15,574]

Sequences

Amino acid sequence

Length: 894

>Phmamm.CG.MTP2014.S666.g11068.01.p
MSFSVSDNAQTVLQAVNKLYHDSSAAEKEKASRWLGEFQKSVFAWETSDQLLRLKNDAES
TYFAAQTMRTKILYSFSELPAETHESLKESLLTHIEELCNTSPITTQLALAVSDLALQMS
SWGMPAVTFMQKYGKEKSSLPYLLEILTVLPEEVNNQALRLGANRRAEILDEMENSAPMV
VDLLKACIDIVDEEKLLTKVFKCLSSWFHLGVLPGNHVARSKLLDVPFSVLRDTSTSSNL
HEAASDCICAALYAAEDVARYRDLMELLFHGTHSLREAYHNAVAHEDTDKCLNLCRIFTE
LAESLSEALVSAPGDGLGDLVTLDLLLLCNGHCQYEVAEITFNLWYRISEMLYSNDHDEL
RLIFGPYIERLIFSLVRHCQMEPDNDKLLDEADDFSDFRLRSADLVRDVVYLVGSTKCFA
QLFSMLNQEGFTPTWDVTEATLFIMGAVAKHIDVTEETVVPQVLQAIVSLPPDSHLAVRH
TSVRLIGELSSWVEKHSQFLEGDQNQFKSSIASISLLRGNVDKTDHILQFLTHALQQKEL
SSIAAVSLQNLCETCKHQMIQHYSALIQLLQVADELHVSAEASIGLLKGVVTIITELPMQ
HLQEAVTLLCKAQVNMLTQQLQQDLSKPGAKDPMLWLDRLAAIFRNINLKNHRNGDTHPC
KEITEEVWLVLKPTLEQHKADNRIVERWCRCLRFAIRCVGKSVQGTLLGPIAETITSMYT
YHQHSCFLYLGSVLVDEFGNDQSLLAMLNAFTQPTFNILNAERGLENHPDTVDDLFRLCC
RFVEKCPVEFLTHAACPALLECALAGLSHEHRDANASVTKFLRSVIECKFPETQKPISDE
VFSVYGKQIVEKSLHACLFQIPSYLYPDIAELWWAVIERDRPVCFAGFRLIKTT

Nucleotide sequence

Length: 2,685

>Phmamm.CG.MTP2014.S666.g11068.01.t
ATGTCATTCAGTGTTTCTGACAATGCTCAAACTGTATTACAAGCAGTAAATAAGTTGTAC
CATGATTCAAGTGCAGCAGAAAAAGAAAAGGCATCCAGATGGCTTGGGGAATTCCAAAAA
TCGGTGTTTGCATGGGAAACATCTGATCAACTACTCAGATTAAAGAATGATGCTGAATCA
ACATACTTTGCAGCACAAACCATGAGGACAAAGATTCTTTATTCATTCTCGGAGCTTCCT
GCAGAAACACATGAGTCCCTAAAAGAATCACTATTAACTCACATTGAGGAACTGTGCAAC
ACTTCACCTATTACAACTCAGCTTGCACTGGCAGTCTCTGATTTAGCATTGCAAATGTCA
TCTTGGGGAATGCCTGCAGTTACATTTATGCAAAAATATGGAAAAGAGAAGTCTTCCTTA
CCATATCTTCTTGAAATTTTAACTGTCCTGCCAGAAGAAGTAAATAATCAAGCTTTAAGG
CTAGGAGCAAACCGAAGGGCAGAAATCTTGGATGAAATGGAGAATTCTGCTCCAATGGTA
GTGGATTTACTCAAGGCTTGCATAGACATTGTCGATGAAGAGAAGTTGCTCACCAAAGTG
TTTAAGTGTCTGTCAAGTTGGTTTCATTTAGGAGTGTTACCAGGCAACCATGTGGCAAGG
AGCAAACTTCTTGATGTTCCTTTTAGTGTCCTGCGAGATACTTCAACATCATCTAACCTT
CATGAAGCAGCATCAGATTGTATTTGTGCTGCATTGTATGCTGCCGAAGATGTAGCAAGA
TATAGAGATCTTATGGAACTTTTATTTCATGGAACTCATTCTTTAAGAGAAGCCTACCAT
AATGCTGTTGCTCATGAAGATACTGACAAGTGTTTAAATTTGTGCCGAATATTTACTGAA
CTTGCCGAGTCATTATCTGAAGCTCTTGTGAGTGCTCCTGGTGATGGCCTTGGTGATCTT
GTGACCCTTGACCTTCTGCTATTGTGCAATGGCCATTGTCAGTATGAAGTTGCAGAGATT
ACATTTAATCTGTGGTACAGAATATCAGAAATGTTGTATTCAAATGATCATGATGAATTG
CGCCTAATTTTTGGTCCTTACATTGAACGACTTATATTTTCTCTTGTACGGCACTGTCAG
ATGGAACCCGACAATGACAAATTACTGGATGAAGCAGATGATTTTAGTGACTTCCGTCTT
CGATCTGCGGACCTTGTGCGAGATGTAGTTTACCTTGTTGGTTCTACCAAGTGTTTTGCT
CAGTTGTTCTCCATGCTTAATCAGGAGGGGTTTACCCCAACATGGGATGTCACAGAAGCT
ACTCTTTTCATAATGGGAGCTGTTGCCAAACACATTGATGTGACTGAGGAAACTGTTGTT
CCGCAAGTACTGCAAGCCATTGTGTCTTTACCTCCTGACAGTCATTTGGCTGTAAGACAT
ACAAGTGTTAGACTTATTGGAGAATTGTCATCATGGGTTGAAAAACATTCTCAATTTCTT
GAAGGTGATCAAAATCAGTTTAAATCCTCCATCGCCTCAATCAGCCTCCTGAGAGGCAAC
GTCGATAAAACAGATCATATACTTCAATTTTTAACACATGCACTGCAACAAAAGGAGCTT
TCATCTATTGCAGCAGTTTCATTACAAAATTTGTGTGAAACATGCAAGCACCAGATGATT
CAGCATTATTCGGCATTAATTCAGCTCCTGCAGGTGGCAGATGAACTTCATGTTTCTGCT
GAGGCTTCAATCGGGTTACTCAAAGGTGTGGTTACTATTATTACTGAACTACCTATGCAG
CATCTTCAAGAAGCTGTTACACTTTTGTGCAAGGCACAGGTTAATATGCTGACTCAGCAA
TTACAACAAGATCTATCAAAGCCAGGTGCAAAGGACCCAATGCTTTGGCTTGATCGTCTG
GCTGCCATATTTCGAAACATAAACCTCAAGAACCATAGAAATGGGGACACACATCCATGT
AAAGAAATTACTGAAGAAGTATGGCTTGTGTTAAAACCTACTCTTGAACAACATAAAGCT
GACAATCGAATAGTTGAAAGATGGTGCAGATGTCTGCGTTTTGCAATTCGCTGTGTGGGA
AAGTCTGTTCAAGGAACTTTACTTGGTCCCATTGCAGAAACCATCACCTCAATGTACACT
TACCATCAGCACAGTTGCTTCTTATACCTCGGAAGTGTTCTAGTTGATGAATTTGGCAAT
GACCAATCTCTGCTTGCAATGCTTAACGCATTTACTCAGCCAACATTCAACATTTTAAAT
GCAGAGCGTGGACTTGAAAATCACCCAGATACTGTGGATGATTTGTTCAGACTATGTTGC
AGGTTTGTAGAAAAGTGTCCAGTGGAATTCCTGACACACGCTGCATGCCCTGCCCTGCTT
GAGTGTGCTTTGGCTGGTCTCAGTCATGAGCACCGTGATGCCAATGCTTCTGTAACAAAG
TTTCTCCGTAGTGTTATTGAGTGCAAATTCCCAGAAACGCAAAAGCCGATTTCTGATGAG
GTTTTCTCTGTCTATGGAAAACAGATCGTTGAGAAATCGTTGCATGCCTGTTTGTTTCAA
ATCCCATCTTATTTGTACCCAGATATTGCAGAGCTTTGGTGGGCAGTGATTGAAAGGGAC
AGACCGGTATGTTTTGCTGGTTTTAGATTAATAAAAACGACTTAA

InterProScan

Gene3D
ARM-like (IPR011989) - T[4-886] 1.2E-284
SUPERFAMILY
ARM-type_fold (IPR016024) - T[11-855] 2.09E-58
Pfam
Importin-beta_N (IPR001494) - T[31-95] 2.1E-5
SMART
Importin-beta_N (IPR001494) - T[31-97] 0.0052
Pfam
Exportin-1/Importin-b-like (IPR013598) - T[103-248] 4.3E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TNPO3_HUMAN 49.097 % 840 0
IPO13_HUMAN 23.195 % 165 8.6E-42





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