- Transcript 'Phfumi.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.C13.24.v2....' >
- Transcript 'Phfumi.CG.MTP2014.S7...' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S6693.g19081.01.t
Possible name(s)
ADGRE1; EGF; HMCN1
Gene model
Location
S6693 [82 / 2,827]
Amino acid sequence
Length: 363
>Phmamm.CG.MTP2014.S6693.g19081.01.p
MDIDECLSFDNCHSNGNCSNTIGSFDCTCITGFSGDGLTCEDIDECLLEIDDCHEIASCS
NTVGGYNCSCAPFTGNGSYCINLSVSVVNTTDVTRSSFVVTWNISAEAQLYKVSIFLENV
LIDARTVTSPPVLFMGLQSGTQYLVNMTTLFPGNLEVISEPVLQQTKPNSVEGIQLTGVN
NNSISLRWQVVLGAEFYQLEYIGTLIATRGKRQAPADPNIIEVLMGTIATLPDLESGTSY
DISIAAVNSGGQGAVTQLTVITAPSPPLVYEVAFYNGTDVNITWDRPVGATHFNVTGIPV
TSGENKTYQTNGIWLYANDLVPVLAYDLVLVACNSMGFCSTNLSQTVRVVPSMGTFFLIK
LIV
Nucleotide sequence
Length: 1,092
>Phmamm.CG.MTP2014.S6693.g19081.01.t
ATGGATATTGATGAATGTTTGTCTTTTGACAATTGTCATAGCAATGGTAATTGCAGTAAC
ACAATTGGAAGCTTTGATTGCACATGTATAACTGGATTTTCTGGTGATGGGCTTACTTGT
GAAGATATAGATGAGTGTTTACTTGAAATTGATGATTGTCATGAAATTGCAAGCTGTAGC
AATACTGTGGGTGGTTACAATTGCAGCTGTGCTCCATTTACTGGAAATGGTTCATATTGT
ATAAATTTATCTGTTTCTGTGGTTAACACCACTGATGTCACAAGATCTTCTTTTGTTGTT
ACTTGGAACATAAGTGCAGAAGCACAGTTGTACAAGGTTTCAATATTTTTGGAAAATGTG
TTAATTGATGCCAGAACTGTCACTTCTCCACCGGTCCTATTTATGGGATTACAGTCTGGA
ACTCAGTATCTTGTTAACATGACAACACTATTTCCTGGAAACCTTGAAGTTATCTCTGAA
CCTGTTTTGCAACAGACAAAGCCAAATTCTGTAGAGGGTATTCAACTTACTGGTGTAAAT
AATAACTCAATTTCGCTGAGATGGCAGGTGGTGCTTGGTGCAGAGTTTTATCAATTGGAG
TATATTGGGACTTTAATAGCAACCCGTGGAAAACGACAGGCACCAGCAGATCCCAATATT
ATAGAGGTGTTAATGGGAACGATTGCAACTCTTCCTGACCTCGAATCTGGAACCTCCTAT
GATATTTCCATTGCTGCTGTAAATAGTGGTGGTCAAGGAGCAGTCACTCAACTTACTGTT
ATCACTGCCCCGTCACCACCATTGGTTTACGAAGTTGCGTTTTATAATGGGACTGATGTA
AATATTACATGGGACCGACCAGTTGGAGCAACACACTTCAATGTGACTGGAATTCCTGTG
ACTAGTGGTGAAAACAAAACATACCAAACAAATGGAATATGGTTATATGCCAACGACTTG
GTACCAGTTCTTGCTTATGATCTTGTATTAGTGGCTTGCAATTCAATGGGATTTTGCAGT
ACAAACCTCAGTCAGACTGTCCGTGTTGTTCCAAGTATGGGCACATTTTTCCTTATCAAA
CTAATAGTGTGA
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[2-41] 16.864 - T[42-81] 11.811 |
| PANTHER |
FBN (IPR011398) - T[2-82] 4.9E-26 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[2-40] 5.2E-9 - T[42-73] 1.6E-7 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[2-41] 1.1E-8 - T[42-81] 0.0011 |
| SMART |
EGF-like_dom (IPR000742) - T[5-41] 0.0065 - T[45-81] 34.0 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[6-82] 4.71E-9 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[18-29] . - T[59-70] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[27-40] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[42-68] . |
| SMART |
FN3_dom (IPR003961) - T[82-155] 12.0 - T[168-253] 6.0E-9 - T[264-339] 12.0 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[84-169] 9.342 - T[170-266] 13.255 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[89-192] 2.95E-7 - T[167-340] 2.65E-19 |
| Gene3D |
Ig-like_fold (IPR013783) - T[162-270] 1.4E-10 |
| CDD |
FN3_dom (IPR003961) - T[168-262] 4.007E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|