- Transcript 'Harore.CG.MTP2014.S1...' >
- Clone 'cima846l19' >
- Transcript 'KH2012:KH.C3.5.v1.C....' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S66.g02366.01.t
Possible name(s)
MITF; TFE3; TFEB
Gene model
Location
S66 [195,897 / 206,348]
Amino acid sequence
Length: 605
>Phmamm.CG.MTP2014.S66.g02366.01.p
MSDHSSSACPPLVGDVYSKNSSANSFNPMRYIPPKCRLNKDDTGCHAQNTGRMPWQDGQA
ITHADSLQSVPAQRPHALECSPHSWQGSNGQSGNVAEANMRYKKSVVYGAYYQCQVETRL
ENPTQYYVKETQRNQVRDYLSQSHDGTKYVVRQLLNPASSAPAGGDGHLGSTPASPMARL
NLSTDSVNEIVDDIVSIESSMGDEHFRYDRTANTLPTISPNQLDTFALGASQNLGVVRKE
QTSSSYPLVKRELTDDEIRHFTKDRIKKDNHNIIERRRRYNINDRIKELGHMVPKSIDPD
VRWNKGSILKAAVDYIHSLKNEQARSRQVEQRAKQMENMNKKLLLRVQELEMMVQQSGIP
VSSDQTDKQNMVQTLLTDSTSPTRDLNFTKEQELQVSSFPSNPVTPSSHSPILVTSPPGT
SNDQVLVFQPGQHHHTPVGSSDQQQMGHNQLMVDGAFTELQQMNSVTSHQQHQHHHQQQQ
QQQQQQQHHHQQQQIQQQQQHQMLNISPVPTYPSHSPNPQDNLSLGNQQVLDPLTSNTVL
SLGDMDISDLNFDPTGASDVSTLMGGSDFSAFLNENSQYSDVMMDDMIKDDIFLSDANNP
NNLNQ
Nucleotide sequence
Length: 1,818
>Phmamm.CG.MTP2014.S66.g02366.01.t
ATGTCAGACCATAGTAGCTCAGCATGTCCGCCGCTAGTGGGCGATGTATACAGCAAGAAC
TCATCAGCTAATAGTTTTAATCCTATGAGGTACATTCCACCGAAATGTCGCCTCAACAAA
GATGATACAGGTTGTCATGCACAGAATACAGGTCGCATGCCGTGGCAAGACGGCCAGGCT
ATAACGCACGCTGATAGTTTACAGTCAGTGCCAGCACAACGGCCCCATGCCCTTGAATGC
TCCCCACATTCATGGCAAGGCAGTAACGGCCAAAGCGGTAACGTTGCCGAGGCCAATATG
CGGTACAAGAAAAGTGTTGTATACGGAGCTTATTATCAATGCCAGGTCGAAACTCGTCTC
GAGAATCCCACGCAGTATTACGTGAAAGAAACGCAACGTAACCAAGTGCGTGACTACCTC
AGCCAATCACACGATGGTACGAAGTATGTTGTCCGCCAGCTGCTTAACCCTGCATCAAGT
GCTCCTGCAGGCGGTGATGGGCACCTCGGCAGCACACCGGCCAGTCCGATGGCGCGACTC
AATCTCTCTACTGATTCGGTAAACGAGATTGTGGACGACATTGTGAGCATTGAGTCGAGT
ATGGGAGATGAGCACTTCCGATATGATCGCACTGCGAATACGCTTCCAACAATTTCACCC
AACCAACTTGACACGTTTGCGTTGGGAGCCTCACAAAATCTCGGGGTAGTTCGGAAAGAA
CAAACTTCATCGTCGTATCCTCTCGTCAAACGGGAACTAACGGACGACGAGATTCGACAT
TTTACGAAAGACAGAATCAAAAAAGACAATCACAATATCATTGAGAGAAGGCGACGTTAC
AACATCAACGACCGAATTAAGGAGCTGGGACACATGGTTCCGAAGTCAATCGACCCGGAC
GTTCGCTGGAATAAGGGATCGATTTTAAAGGCAGCAGTCGATTATATTCATTCGCTTAAG
AACGAGCAAGCACGCTCCCGGCAAGTTGAACAGAGGGCAAAGCAAATGGAAAACATGAAT
AAGAAGTTACTGCTACGAGTTCAGGAACTAGAAATGATGGTCCAACAAAGCGGGATCCCC
GTCTCTAGTGATCAGACGGACAAACAAAACATGGTACAAACCCTGCTTACCGACTCAACG
TCCCCCACACGCGATTTAAACTTCACAAAAGAGCAAGAATTGCAAGTTTCAAGTTTTCCC
TCGAATCCCGTGACACCATCGTCACATTCCCCTATACTGGTCACAAGTCCACCCGGCACG
TCCAATGACCAAGTTCTGGTGTTTCAGCCAGGCCAGCATCATCACACGCCTGTCGGTAGC
AGCGACCAGCAACAAATGGGACACAACCAGTTGATGGTGGACGGTGCATTCACTGAATTG
CAGCAGATGAATTCTGTAACATCCCACCAACAGCACCAGCATCATCACCAGCAACAACAA
CAACAGCAACAGCAGCAACAACATCATCATCAACAACAACAAATACAACAGCAGCAGCAA
CATCAAATGTTAAACATTTCGCCTGTGCCCACCTATCCTTCTCATTCACCCAATCCTCAA
GACAACTTGAGTTTAGGAAACCAGCAAGTACTGGATCCCCTCACCAGTAACACAGTGCTG
AGTCTTGGTGACATGGATATATCCGATTTGAACTTTGACCCCACTGGTGCCTCAGACGTC
AGCACGTTGATGGGCGGAAGCGATTTTAGTGCCTTTTTAAACGAAAACTCGCAGTATTCG
GATGTCATGATGGACGATATGATTAAGGACGACATCTTCCTCTCGGACGCCAATAACCCG
AACAATCTGAACCAGTAA
| PANTHER |
TFEB (IPR024098) - T[113-484] 2.6E-89 |
| Pfam |
MiT/TFE_N (IPR031867) - T[115-195] 3.0E-12 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[262-328] 1.44E-15 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[266-319] 16.164 |
| CDD |
bHLH_dom (IPR011598) - T[267-324] 3.85738E-16 |
| Pfam |
bHLH_dom (IPR011598) - T[267-320] 3.1E-16 |
| SMART |
bHLH_dom (IPR011598) - T[272-325] 6.9E-16 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[277-358] 8.2E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TFE3_HUMAN | 43.233 % | 212 | 5.7E-61 |
| TFEB_HUMAN | 40 % | 182 | 7.89E-51 |
| MITF_HUMAN | 39.863 % | 183 | 7.75E-51 |