- Transcript 'KH2012:KH.C6.50.v1.A...' >
- Transcript 'Phmamm.CG.MTP2014.S7...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.S404.8.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S67.g02387.01.t
Possible name(s)
DHX16; DHX8
Gene model
Location
S67 [79,268 / 82,844]
Amino acid sequence
Length: 1,191
>Phmamm.CG.MTP2014.S67.g02387.01.p
MDELKQLEYLSLVSKVCTELDNHLGLNDKDLAEFIIRLAEKYPNIKKFSKALKKKGADFS
DSLMENLLSLIKRMRPSDKNNEVEEAPSMVTEDGKKNYKAMFPALCQPDDVENAKAEIEE
LEKSLMAIKQDSKEVEERKATSPPRSSRDHSDRRDKHSTNKRRSDRRHDDEEKRDRHRSR
RRSRDDSYDSKRSRGDHESRRSYDSHDNRRNRDSRDSRRYDEERNGQQHTQREITPGDIY
DGKVSSIMQFGCFVQLQGMHKRCEGLVHISELRSEGRVSSVADVVSRGQMCKVKVLSHTG
TKTSLSMKDVDQRTGEDLNPNRTRRMQNIETSKDEVACRNPDRPSDLVLGGTSDSSSMSN
QKRINKVSDMELWEIKQMVSAGCMDPTELPEFDEETGVLPKAESDTEDLEIDLLEEEPPF
LRGHTKQSIDLSPVRIVKNPDGSLSKAAMMQNALSKERREIKQQQREAELESASTSQTKS
WSDPMPKTATPANFAGAKGGLLSGDIPEWKKQAFGGQKASYGKKTELSIIEQRQSLPIYK
LKDQLVQAVEDNQVLIVIGETGSGKTTQITQYIAEAGYTIRGKIGCTQPRRVAAMSVAKR
VSEEFGCRLGQEVGYTIRFEDCTSQETKIKYMTDGMMLRECLIDFDLSQYSVIMLDEAHE
RTIHTDVLFGLLKKCVQKRKDLKLIVTSATLDAVKFSEYFFGAPIFTIPGRTFPVEIMYT
KDPEPDYLDASLITVMQIHLTEPPGDVLLFLTGQEEIDTACEILFERMKSLGGDVPELII
LPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIHYVVDPGFVKQNVYNSKT
GIDQLVVTPISQAQAKQRAGRGGRTGPGKCYRLYTERAYRDEMLATAVPELQRTNLASTV
LSLKAMGINDLLSFDFMDPPPMETLVTAMEQLYQLSALDDEGLLTRLGRRMAEFPLDPML
CKMLIMSVHLSCSEEILTVVSMLSVQNVFYRPKEKQTLADQKKAKFHQNEGDHLTLLSVY
NSWKNNKFSNPWCFENFIQARTLRRAQDVRKQMLGIMDRHKLDVVTCGKKITMIQKAILS
GFFRNAAKKDPQEGYRTLVDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTAID
PKWLVEFAPKFFKMGDPTKLSKQKKQMRLEPLYNRYEEPNSWRISRAYRRR
Nucleotide sequence
Length: 3,576
>Phmamm.CG.MTP2014.S67.g02387.01.t
ATGGATGAATTAAAGCAACTAGAATATCTGTCACTTGTGTCTAAAGTATGTACTGAACTG
GACAACCATCTGGGTTTAAACGACAAGGACTTAGCAGAATTTATAATTCGGTTGGCTGAA
AAATATCCTAATATTAAAAAGTTCTCCAAAGCCCTAAAGAAAAAGGGAGCCGATTTTTCT
GATTCTCTGATGGAAAACTTACTGTCTTTGATTAAACGAATGAGACCATCTGATAAAAAT
AATGAAGTGGAAGAAGCTCCAAGTATGGTTACCGAAGATGGAAAGAAAAACTACAAAGCT
ATGTTTCCAGCATTGTGTCAGCCTGATGATGTTGAAAATGCTAAGGCAGAAATTGAAGAA
TTGGAAAAATCTCTGATGGCAATAAAACAAGATTCGAAAGAAGTGGAAGAAAGAAAAGCA
ACATCACCTCCTCGATCTTCTCGAGATCATTCAGATAGAAGAGACAAACATTCAACGAAC
AAGCGACGATCAGATCGGAGACATGATGATGAAGAGAAAAGAGATCGCCACAGATCTAGA
AGAAGATCACGTGATGATTCATATGACAGCAAGCGAAGCCGTGGAGATCATGAATCAAGG
AGGTCGTATGATTCTCATGATAATAGAAGAAATCGTGATAGTCGTGACTCTAGGAGGTAT
GATGAAGAAAGAAATGGACAACAGCACACACAGCGGGAAATCACCCCTGGTGATATATAT
GATGGAAAAGTATCTTCTATAATGCAGTTTGGTTGCTTCGTGCAGTTGCAGGGCATGCAT
AAGCGTTGCGAAGGACTGGTCCACATATCTGAGCTCAGAAGTGAAGGTCGTGTTTCAAGT
GTGGCTGATGTTGTTTCCCGTGGACAAATGTGCAAAGTGAAAGTTCTAAGCCACACGGGT
ACAAAGACAAGTCTGTCAATGAAAGACGTAGACCAACGGACTGGGGAAGATCTGAACCCA
AACAGAACCCGGCGCATGCAAAACATTGAGACTAGCAAAGATGAAGTTGCTTGCCGAAAT
CCTGATCGGCCTAGTGACCTGGTGCTGGGTGGGACTTCTGATAGTAGCTCGATGTCAAAT
CAGAAACGCATTAATAAAGTGTCTGATATGGAGTTATGGGAGATCAAACAAATGGTATCA
GCTGGTTGCATGGATCCTACAGAGCTTCCAGAGTTTGATGAAGAAACTGGGGTACTGCCC
AAAGCGGAAAGTGATACAGAAGACCTCGAGATTGATTTGTTGGAGGAGGAACCACCTTTT
CTGCGGGGACACACAAAGCAAAGTATTGATCTCAGTCCAGTTAGAATTGTTAAAAACCCT
GATGGATCCTTGTCCAAAGCTGCTATGATGCAAAATGCCTTGTCAAAGGAAAGGCGAGAG
ATTAAACAGCAGCAGCGTGAGGCTGAACTGGAGTCAGCTTCCACTTCTCAAACAAAAAGT
TGGAGTGATCCGATGCCCAAAACAGCAACACCTGCAAATTTTGCTGGGGCAAAAGGTGGA
CTTTTGTCAGGGGATATTCCAGAGTGGAAAAAACAGGCATTTGGTGGCCAAAAAGCTTCA
TATGGAAAGAAAACTGAGCTCTCAATAATTGAACAAAGACAAAGTTTGCCAATCTACAAA
CTAAAAGATCAGCTTGTGCAAGCTGTAGAAGATAATCAGGTACTAATAGTTATTGGAGAA
ACTGGATCTGGAAAGACAACACAGATTACACAGTACATTGCTGAGGCTGGTTACACCATT
CGAGGTAAAATTGGATGTACCCAACCAAGAAGAGTAGCTGCAATGTCTGTTGCTAAGCGC
GTGTCTGAAGAATTTGGTTGTCGTCTTGGTCAGGAAGTTGGTTACACTATTCGATTTGAG
GATTGCACCAGTCAAGAAACTAAAATCAAGTACATGACAGACGGTATGATGCTTCGGGAG
TGTCTTATTGACTTCGACCTGTCTCAATACTCAGTAATTATGTTGGATGAAGCCCATGAA
AGGACAATTCACACAGATGTGTTGTTTGGCTTGCTGAAAAAGTGTGTTCAAAAGCGCAAG
GACCTAAAGTTGATTGTTACCTCTGCAACTTTAGATGCTGTGAAATTCTCTGAGTACTTT
TTTGGTGCTCCTATTTTTACCATTCCGGGCCGAACATTTCCAGTGGAGATTATGTACACA
AAAGATCCAGAGCCTGACTATTTGGATGCCTCACTGATCACTGTGATGCAAATTCATCTT
ACAGAACCCCCTGGTGATGTTCTTCTCTTTCTTACTGGTCAGGAGGAAATTGACACTGCC
TGTGAAATTCTATTTGAAAGGATGAAGTCACTTGGAGGAGATGTACCAGAACTTATTATT
TTACCAGTGTATTCAGCATTGCCATCTGAAATGCAGACTCGCATTTTTGACCCTGCTCCG
CCAGGAAGTCGCAAAGTTGTTATTGCTACCAACATTGCGGAAACGTCATTAACAATTGAC
GGCATTCATTATGTTGTAGACCCTGGATTTGTCAAACAAAATGTTTACAACAGCAAAACT
GGCATTGATCAGCTGGTTGTAACTCCTATATCACAGGCCCAGGCTAAACAAAGGGCTGGA
AGAGGAGGCAGGACTGGTCCTGGAAAATGTTACAGGCTGTATACTGAAAGAGCCTACAGG
GATGAGATGTTGGCAACTGCTGTTCCGGAACTGCAGCGAACGAATCTTGCATCCACAGTT
CTTTCTCTAAAGGCCATGGGTATCAATGATCTGCTTTCATTTGACTTCATGGACCCTCCC
CCAATGGAAACTCTAGTAACAGCCATGGAACAACTTTACCAATTAAGTGCACTTGATGAT
GAAGGTCTATTAACTAGACTTGGAAGAAGAATGGCAGAGTTTCCACTTGATCCAATGCTG
TGCAAAATGCTGATCATGTCAGTACATTTGTCATGCAGTGAGGAAATCTTGACTGTAGTG
TCCATGCTTTCTGTACAAAATGTGTTTTACAGGCCAAAAGAAAAGCAAACCTTGGCTGAT
CAGAAAAAGGCCAAATTTCACCAAAACGAGGGTGACCATTTGACATTACTATCTGTGTAC
AATTCCTGGAAAAACAACAAGTTTAGCAACCCTTGGTGCTTTGAGAACTTCATCCAGGCA
AGGACACTTCGTCGAGCTCAAGACGTTAGAAAACAGATGTTGGGAATTATGGATCGCCAC
AAACTAGATGTAGTTACCTGTGGAAAAAAGATCACCATGATACAGAAGGCTATTTTGAGT
GGATTTTTTCGAAATGCTGCCAAGAAGGATCCTCAGGAAGGATACAGAACATTGGTTGAC
CAACAAGTGGTGTACATTCATCCAAGCAGTGCTTTGTTTAACAGGCAACCAGAATGGGTT
GTTTATCATGAACTTGTGCTCACTACCAAGGAGTACATGAGGGAGGTAACAGCTATTGAT
CCCAAATGGCTGGTTGAGTTTGCACCCAAGTTTTTCAAGATGGGTGACCCGACCAAGCTG
AGTAAGCAAAAGAAACAAATGCGCTTGGAGCCGTTGTACAACCGATACGAAGAACCGAAC
TCCTGGCGTATTTCCAGGGCGTATCGTAGGAGATAG
| SMART |
S1_dom (IPR022967) - T[235-308] 3.3E-13 |
| Pfam |
S1_domain (IPR003029) - T[235-305] 2.1E-11 |
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[236-314] 7.46E-13 |
| ProSiteProfiles |
S1_domain (IPR003029) - T[237-308] 15.476 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[532-1147] 1.66E-135 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[534-718] 2.7E-33 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[544-692] 3.7E-7 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[546-709] 19.318 |
| ProSitePatterns |
DNA/RNA_helicase_DEAH_CS (IPR002464) - T[651-660] . |
| CDD |
Helicase_C (IPR001650) - T[716-873] 6.19099E-13 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[727-907] 17.326 |
| Pfam |
Helicase_C (IPR001650) - T[738-866] 8.5E-13 |
| SMART |
Helicase_C (IPR001650) - T[762-866] 1.6E-19 |
| SMART |
Helicase-assoc_dom (IPR007502) - T[927-1017] 1.7E-38 |
| Pfam |
Helicase-assoc_dom (IPR007502) - T[928-1016] 9.8E-24 |
| Pfam |
DUF1605 (IPR011709) - T[1074-1150] 8.5E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX8_HUMAN | 79.516 % | 1644 | 0 |
| DHX16_HUMAN | 56.221 % | 798 | 0 |
| PRP16_HUMAN | 46.237 % | 754 | 0 |