- Transcript 'KH2012:KH.C9.358.v1....' >
- Transcript 'KH2012:KH.C9.358.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S67.g02389.01.t
Possible name(s)
SCUBE1; SCUBE2; SCUBE3
Gene model
Location
S67 [95,054 / 105,435]
Amino acid sequence
Length: 750
>Phmamm.CG.MTP2014.S67.g02389.01.p
MIGTHRCTCRNGYKLQPNGRTCLPRGLCTNGNGGCQHICHHFSGNTFCACRGGYFLHPNG
KQCEPAPDCREFNCTLATCEVTPIGVQCSCPHETGRYVLAPNRRNCLDYDECQENNGSCE
YGCLNNYGSYKCVCPDGYRLASDQRSCVDIDECEYNNTCWYKCTNLPGSYECSCPDGYQK
YATKRCGDIDECSSNNGGCAQYCKNRPGGYECFCKKDFKLAWNQKDCIHINRCSTLRGPN
RPNGVLRCQGKNCYLACSGVSFFRAYNPTNPSYMYSCDSMSPQARDVQSAQTTKAFPLAT
INAVNSVTNHTLPICGGKCRKKCLHNKAKKEGKKAFRVFRRSARQLFRIMTSSSVNLRVK
KLSGARQPPRGLVNKLGCLLGEKKIDKACHLCPPGQRANVLSGTCVPCSTGSYQSRPGQV
TCQACPLSSDDGDTATRSPLQCPGVEYVHPVTYPPMVCCHVILVPLELISPRGEGHRVLS
VGALSVPQVSVGRVLINAQQEAAVQVITMIQLEITAKGVRKVFINRREVTGIVLPVLETP
PLTLTPLSPFTSAKYLMCTEQRCGQARTNYGGMIETPNYPGNYTGNSNCRWVVRLSHKKS
VLVFIPEISLPDDSRDCIRVKTRKEREIYLLRTCRSVQKPLIYATSSISKLIVEFQSDSY
SAAKGFQMHYVVYDSSYDKLIKFIIGDSRLLADNYYQHVLQDARSRNVLFEVLAKPTRFA
EYQESVLKKLLTVPFYKYLTQKIFKGLHYR
Nucleotide sequence
Length: 2,253
>Phmamm.CG.MTP2014.S67.g02389.01.t
ATGATCGGCACGCACCGATGCACATGCAGGAACGGATACAAACTTCAACCGAATGGCAGA
ACGTGCTTGCCTAGAGGATTGTGTACAAACGGCAACGGCGGATGCCAACACATCTGCCAC
CACTTTTCCGGCAACACATTCTGCGCATGCCGGGGCGGCTATTTTCTCCATCCAAACGGA
AAACAATGCGAACCAGCCCCTGACTGCCGGGAATTCAATTGTACGCTGGCAACTTGTGAA
GTGACGCCGATTGGAGTTCAGTGTTCCTGTCCCCATGAGACTGGAAGATACGTGTTAGCG
CCAAACCGACGAAATTGCCTCGACTACGATGAATGTCAGGAAAACAACGGAAGCTGTGAA
TACGGTTGTCTTAATAACTATGGAAGTTACAAATGCGTTTGTCCTGACGGTTACCGGCTA
GCAAGTGACCAAAGGTCGTGCGTTGACATAGATGAGTGTGAATACAACAACACTTGCTGG
TACAAATGTACGAATCTACCGGGAAGTTACGAATGTTCATGCCCGGACGGTTATCAAAAA
TACGCCACTAAGCGATGTGGAGATATTGATGAATGTTCAAGCAACAACGGTGGTTGCGCT
CAATACTGCAAAAACAGACCTGGAGGATATGAGTGTTTCTGCAAGAAAGATTTCAAACTT
GCCTGGAATCAAAAGGACTGTATTCACATAAACAGATGTTCAACACTTCGAGGCCCAAAC
AGGCCGAATGGTGTTCTTCGGTGTCAAGGAAAGAACTGCTATCTGGCTTGCAGTGGTGTC
AGCTTCTTTCGAGCTTATAACCCAACAAATCCCAGTTATATGTATTCCTGCGACTCGATG
TCACCACAAGCAAGGGATGTACAATCTGCTCAAACAACAAAAGCGTTTCCACTTGCCACA
ATCAACGCAGTTAATTCGGTTACGAATCACACTTTACCGATTTGCGGAGGAAAATGCAGA
AAGAAATGCCTTCACAACAAGGCCAAGAAAGAGGGCAAAAAAGCATTTCGAGTTTTCCGA
AGATCTGCCAGACAGCTGTTTCGAATCATGACCTCATCTTCGGTGAACCTCAGAGTGAAG
AAACTTTCAGGTGCTCGACAGCCACCCCGGGGATTAGTCAACAAGTTGGGTTGTTTGCTG
GGTGAAAAAAAGATAGACAAAGCATGTCATTTGTGCCCCCCAGGACAGCGGGCAAATGTT
TTATCTGGGACTTGTGTTCCATGCTCCACTGGTAGCTACCAAAGTAGACCTGGTCAGGTG
ACATGCCAGGCATGTCCGCTCTCAAGCGACGATGGAGATACTGCCACCCGATCACCCCTT
CAATGTCCAGGTGTGGAATATGTCCACCCGGTCACGTATCCACCGATGGTTTGTTGCCAT
GTTATCCTTGTCCCTCTGGAACTTATCAGCCCGAGAGGGGAAGGACATCGTGTATTGAGT
GTGGGAGCTCTGTCAGTGCCACAGGTGTCGGTTGGACGAGTTTTGATCAATGCACAGCAG
GAAGCTGCAGTACAGGTCATTACTATGATACAACTAGAGATTACTGCGAAAGGTGTGCGA
AAGGTTTTTATCAACCGGAGGGAGGTAACAGGAATTGTCTTGCCTGTCCTGGAAACACCA
CCACTGACTTTGACGCCGCTCAGTCCCTTCACGAGTGCAAAGTATTTAATGTGCACAGAA
CAAAGATGCGGACAAGCGCGAACGAATTATGGTGGAATGATTGAGACTCCAAACTACCCT
GGAAATTATACGGGAAACAGCAACTGTCGTTGGGTGGTTCGACTTTCTCACAAGAAAAGT
GTGCTTGTCTTTATTCCCGAAATCTCTCTCCCAGACGACTCACGTGACTGTATCCGTGTT
AAGACAAGAAAAGAACGTGAAATCTATCTACTTCGCACGTGTCGTTCTGTGCAAAAGCCA
CTAATCTACGCCACCAGCTCCATATCAAAACTAATCGTCGAGTTCCAGTCAGACAGCTAC
TCCGCGGCCAAGGGCTTCCAAATGCATTATGTCGTATATGATTCATCCTACGATAAACTT
ATTAAATTCATCATTGGCGATTCTAGACTTTTGGCTGACAACTATTACCAACACGTTTTA
CAGGACGCCCGTTCGCGCAATGTTTTATTTGAAGTACTGGCAAAACCTACTCGGTTCGCC
GAGTATCAAGAGTCAGTTCTGAAAAAATTGCTCACAGTTCCCTTCTACAAATATTTGACA
CAGAAAATTTTTAAGGGGCTTCACTATCGATGA
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[8-153] 2.04E-14 |
| SMART |
EGF-like_dom (IPR000742) - T[27-64] 2.9 - T[68-107] 120.0 - T[111-148] 0.0028 - T[152-187] 0.1 - T[191-228] 0.06 - T[377-423] 210.0 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[108-148] 1.0E-6 - T[149-187] 8.6E-9 - T[188-228] 2.8E-7 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[108-148] 7.592 - T[149-187] 11.17 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[123-134] . - T[163-174] . |
| Pfam |
cEGF (IPR026823) - T[129-152] 1.5E-10 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[132-147] . - T[172-186] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[149-172] . - T[188-212] . |
| SMART |
Tyr-kin_ephrin_A/B_rcpt-like (IPR011641) - T[395-442] 9.5E-5 |
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[554-672] 3.5E-16 |
| Pfam |
CUB_dom (IPR000859) - T[563-670] 2.6E-12 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[563-672] 6.54E-17 |
| SMART |
CUB_dom (IPR000859) - T[563-673] 6.5E-9 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[563-673] 16.471 |
| CDD |
CUB_dom (IPR000859) - T[564-670] 3.37722E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SCUB1_HUMAN | 29.354 % | 326 | 1.38E-98 |
| SCUB3_HUMAN | 29.157 % | 290 | 2.59E-85 |
| SCUB2_HUMAN | 28.486 % | 316 | 8.89E-95 |