Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Cisavi.CG.ENS81.R77....'
  2. Transcript 'KH2012:KH.L22.74.v1....'
  3. Transcript 'Phmamm.CG.MTP2014.S4...'
  4. Transcript 'KH2012:KH.C6.141.v1....'
  5. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S6848.g19115.01.t

Possible name(s)

NLRP12; NOD1; NOD2

Location

S6848 [472 / 2,564]

Sequences

Amino acid sequence

Length: 351

>Phmamm.CG.MTP2014.S6848.g19115.01.p
MPCNSVKPDPLPAVHDSPDMKHDETETEESDFESSVDSVEENSVNILVDTTAEKLQQHLK
TVVDEKCCREYGRAVEPVDLVLVKYTGQKDRDPKKQREKTASVINKGNELTCDTTIENMF
ERAKIEAEDNEKDKKSVGVVGAVGVGKSTLTKVIVQKILKKQILANASLVFYITVGSIDL
EQKTDLFELLFSSLIAEGSLSIQEAEKKELINFILKDPNTVVIIDGLDEAKTENLHLYPV
VSPFKDTKPMALLYNILNGKLLINAYKLVTSRITQFIDASPEYRPKFVLEILGLAPSEQQ
KLAICVCGEQFDRVWKILQDNPALLECCVVPVNMLMALNFLLGRGGTSDAL

Nucleotide sequence

Length: 1,056

>Phmamm.CG.MTP2014.S6848.g19115.01.t
ATGCCTTGTAATTCTGTTAAACCAGATCCATTGCCTGCTGTGCATGATTCTCCTGACATG
AAACATGATGAGACAGAAACTGAAGAATCAGATTTTGAAAGTTCAGTAGATTCTGTTGAA
GAAAATAGTGTCAATATATTAGTTGATACCACAGCAGAAAAATTGCAACAGCATCTGAAG
ACAGTAGTAGATGAAAAATGTTGTAGAGAATATGGAAGAGCAGTGGAACCAGTTGATCTT
GTGCTTGTAAAATACACTGGACAGAAAGACAGAGATCCTAAAAAACAACGAGAAAAAACA
GCTAGTGTTATAAATAAAGGAAATGAACTGACATGTGATACCACTATTGAAAATATGTTT
GAAAGAGCAAAGATTGAAGCAGAAGATAATGAAAAAGATAAAAAGTCAGTCGGTGTTGTT
GGTGCAGTTGGAGTGGGAAAGAGCACATTGACAAAAGTTATTGTGCAAAAAATTTTGAAA
AAGCAAATACTTGCAAATGCTTCGCTTGTATTTTATATCACAGTGGGTTCCATTGACCTT
GAGCAAAAAACAGATTTGTTTGAATTACTTTTCTCATCACTGATTGCAGAAGGAAGTCTT
TCAATACAGGAAGCAGAGAAAAAGGAGCTGATTAATTTCATCTTAAAGGATCCCAACACC
GTAGTAATCATTGATGGTCTGGATGAAGCCAAAACTGAAAATTTACATTTATATCCAGTT
GTATCACCATTTAAAGACACCAAACCAATGGCTCTATTATACAACATTCTGAATGGCAAA
CTGCTTATTAATGCTTACAAGCTGGTAACATCAAGAATTACTCAGTTTATTGATGCTTCT
CCAGAATACAGACCAAAATTTGTTTTGGAAATTTTGGGTTTAGCACCGAGTGAACAGCAA
AAACTTGCTATATGTGTATGTGGTGAACAGTTTGACAGAGTTTGGAAAATCCTCCAAGAC
AACCCAGCTTTGTTAGAATGCTGTGTAGTACCTGTCAACATGCTTATGGCTCTTAACTTT
CTGTTGGGAAGAGGAGGAACTTCGGATGCTTTGTGA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[129-326] 1.84E-11
SMART
AAA+_ATPase (IPR003593) - T[133-267] 0.0038
ProSiteProfiles
NACHT_NTPase (IPR007111) - T[135-272] 13.817
Pfam
NACHT_NTPase (IPR007111) - T[138-304] 1.8E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value