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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C7.633.v2....'
  2. Transcript 'Moocul.CG.ELv1_2.S10...'
  3. Transcript 'KH2012:KH.C1.287.v1....'
  4. Transcript 'KH2012:KH.S1877.1.v1...'
  5. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S689.g11246.01.t

Possible name(s)

CD209; CLEC4D; CLEC4M

Location

S689 [83,534 / 84,341]

Sequences

Amino acid sequence

Length: 113

>Phmamm.CG.MTP2014.S689.g11246.01.p
MTTKRNWENARRYCKSIGGDLATWGMRNATVRNWIVTNMIETRPPGYYWIGLNDLEREGV
WKYIDGVPVTNTNTDFHQGEPNNSGDCGQLYYVQDFAMDDYPCFINKLAICEQ

Nucleotide sequence

Length: 342

>Phmamm.CG.MTP2014.S689.g11246.01.t
ATGACCACTAAAAGAAATTGGGAAAACGCGAGGAGATACTGTAAGTCAATTGGTGGAGAT
TTGGCGACCTGGGGAATGAGAAATGCGACTGTTCGCAACTGGATTGTTACAAATATGATC
GAAACGCGACCCCCCGGATACTACTGGATCGGTTTGAATGACCTTGAACGGGAAGGAGTC
TGGAAATATATAGATGGAGTTCCCGTGACCAACACCAACACCGATTTTCATCAGGGTGAG
CCAAACAACAGTGGGGACTGTGGCCAACTTTACTATGTTCAAGATTTTGCAATGGATGAT
TACCCATGTTTTATTAACAAATTGGCAATCTGTGAGCAATGA

InterProScan

Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[1-113] 2.7E-25
ProSiteProfiles
C-type_lectin-like (IPR001304) - T[1-112] 14.324
SUPERFAMILY
CTDL_fold (IPR016187) - T[2-113] 4.22E-25
SMART
C-type_lectin-like (IPR001304) - T[3-112] 5.1E-5
Pfam
C-type_lectin-like (IPR001304) - T[4-113] 1.3E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value