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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA129YG18' > 
  2. Clone 'cien230611' > 
  3. Clone 'cima812o13' > 
  4. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S692.g11261.01.t

Possible name(s)

RDH11; RDH12; RDH14

Gene model

Phmamm.CG.MTP2014.S692.g11261

Location

S692 [26,439 / 28,972]

Sequences

Amino acid sequence

Length: 320

>Phmamm.CG.MTP2014.S692.g11261.01.p
MAGQTSLKNGKVDCDVRLDGKTVVITGANSGIGFETAKNLAKRGAKIVMACRDTKSAQEG
KEKILAETPETIIEIFKLDLGSIASVREFAESFLQKEDSLDILINNAGVMYCPQGKTVDG
FETHIGINHIGHFLLTNLLLDLLKKSSPSRIVVVSSAGYKRGEMKWDDMMNDKNYQPFPA
YFDSKLANTLFAQELSRKLEGTGVTCNALHPGMVNTNLGRHMREENTSAIRRFFRNLIWP
LLPLFFKTPEQGSQASIFCAIAPELQDVTGKYFRLFLVLAQYLKFLFNSSNCAEEELLPK
ALNREDAEKLWKMSEEWCGL

Nucleotide sequence

Length: 963

>Phmamm.CG.MTP2014.S692.g11261.01.t
ATGGCAGGTCAAACGTCTTTGAAAAATGGAAAAGTTGATTGCGACGTTCGGCTTGATGGG
AAAACTGTTGTTATCACTGGTGCCAATAGTGGAATTGGATTTGAAACAGCAAAAAATTTA
GCTAAACGAGGAGCGAAAATTGTGATGGCTTGCAGAGATACAAAAAGTGCTCAAGAAGGA
AAGGAAAAGATTCTTGCAGAAACTCCAGAAACTATTATTGAAATTTTCAAACTAGATTTG
GGGTCCATTGCATCAGTTCGGGAATTTGCAGAAAGTTTTTTACAAAAAGAAGACAGTTTG
GATATTCTAATAAACAACGCAGGTGTTATGTATTGCCCACAAGGAAAGACTGTTGATGGA
TTTGAAACTCATATTGGCATAAACCACATCGGACATTTTCTCCTCACAAATCTGTTGCTG
GATTTGTTAAAAAAAAGTTCACCGAGTCGAATCGTGGTTGTGTCATCAGCTGGATATAAG
AGAGGGGAAATGAAATGGGACGATATGATGAACGATAAAAACTACCAACCATTTCCAGCT
TATTTTGACAGCAAACTTGCCAACACTTTGTTTGCTCAGGAGCTCAGTCGAAAGCTGGAA
GGCACTGGTGTGACATGCAATGCTCTGCACCCAGGAATGGTTAACACTAACCTTGGACGA
CACATGAGAGAAGAAAATACATCAGCTATCCGAAGGTTTTTCCGAAATCTCATTTGGCCA
TTGCTTCCATTGTTTTTCAAAACACCTGAACAAGGATCACAAGCTTCGATATTTTGTGCG
ATTGCCCCAGAACTACAAGATGTTACGGGAAAATATTTTAGATTGTTTCTGGTTTTAGCA
CAATACTTAAAGTTTTTGTTCAACAGTTCCAACTGTGCAGAGGAAGAGCTTCTTCCCAAA
GCACTTAACAGGGAAGACGCTGAAAAACTGTGGAAGATGTCGGAAGAATGGTGTGGATTG
TAA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[18-274] 4.72E-58
Pfam
SDR_fam (IPR002347) - T[21-225] 3.6E-33
PRINTS
SDR_fam (IPR002347) - T[22-39] 1.4E-16 - T[98-109] 1.4E-16 - T[143-159] 1.4E-16 - T[181-200] 1.4E-16 - T[202-219] 1.4E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 43.631 % 244 2.49E-79
RDH14_HUMAN 47.152 % 258 1.33E-84
RDH12_HUMAN 45.016 % 256 4.77E-84