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  1. Transcript 'KH2012:KH.C8.74.v1.A...'
  2. Transcript 'Haaura.CG.MTP2014.S4...'
  3. Transcript 'KH2012:KH.C10.439.v1...'
  4. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S694.g11280.01.t

Possible name(s)

CCDC6; CCDC88C; SYCP1

Location

S694 [44,485 / 46,547]

Sequences

Amino acid sequence

Length: 455

>Phmamm.CG.MTP2014.S694.g11280.01.p
IISSSLFRNFLILPFSISCIGLVLSYFKSIKKMSESESDTDGVNSTQGAAAVAIKRDELA
IRVASLQQENRVLKMELETYKLRCNALQEENKSLRQASVNIQAKAEQEEEYISNILMKKI
QELKKEKETLVNKYETEEEFLTNELQRQLSQLRQEKVELEQTLEREQEKQVNTLMRKIEK
LKRETHDKHYKLEELRREKIELENTLEKEQEGLVNRLWKKMDKLEAEKRLLQEKLNQPVS
APPSPRQSVSLESGSSDNLTAHVRYLKKEVDYLRRQVKAMQNERNSKVSLYLNEEKILRE
ENARLHRQLMLETERREALSRQLSESESSLEMDDESRHNLDTSASFVSGGPSSVRPRAIS
SPVPYAMVTGRPISPHTSVTAAGFAPPSPMGKGAVQQPNNSSSPGASLLSSSPGTSRQNN
VRPQMTQQMSTDQREFIKPSPPASPASRSKSMFDS

Nucleotide sequence

Length: 2,062

>Phmamm.CG.MTP2014.S694.g11280.01.t
GTTTGACCAACAAGGTTTCATCAGTGCAGCTAGTGACAAGACATATGCCTCACCAAATCT
GGACATAAGGACAAACCATGGTGGAAATGAAACTACTATGGTCAAACAACCGCTTGGTAA
CCAAAGTTTTAAGCTATTAAAATTAGCAAGTGGCCGTTTTATTTACCTTGTCCAATTCTT
TGTCAATAATCTTCTCAGCAACATCCAGTGCTATGAGAACTATACCAGCAACTAAGAAAA
TGAGCCCTATAACTGTCAGAGTAACATGACAAGGGGTCTTTCTACAACACCCCATATTTG
CTACAGCTCCAAGTTCTAGTGAATGTTTTACATGGTTAAACAAGTGTTCAGAAACAACAC
TAACAAAAAGCAGCAAGAAAACAACAGTTTCACTACAAAAAATTAGGAACTTAATGATTT
AAGCAGGGTGATTTTGATCAGGTAAATAAATTGACCACCATAAGTTTCAGCCAGGCACGA
AACGCAAAAATGAAACATTTCCAGTCAATGCAAACATATGACAAACAATGAACTTTGGCA
AACGAAAGGGTACATTTTGTACTACAGCAGTGGAAGATGCTTGTCTTGAAATTGAAATGC
TAAGTGAAAGAACATGCAAATGTAACTAAGAAATAAATAGCTTTTTGCACACACACAGTC
TTTTGAGTGTTTTTTGTAACACTTGTCGAAACTTCAGGAGTCAAACATGGACTTTGAGCG
CGATGCCGGTGAAGCTGGTGGGGATGGCTTAATAAACTCTCTTTGGTCTGTAGACATTTG
TTGAGTCATTTGGGGCCGCACATTGTTTTGACGAGAAGTGCCTGGGCTACTGGACAAAAG
ACTTGCACCTGGTGATGAGCTGTTGTTTGGTTGTTGAACAGCACCTTTACCCATTGGTGA
GGGTGGTGCAAACCCCGCTGCTGTTACACTAGTATGGGGAGAAATAGGGCGCCCTGTTAC
CATTGCGTAGGGTACAGGGCTTGAAATAGCACGGGGACGAACTGATGAAGGACCGCCACT
TACAAAACTAGCAGAAGTGTCCAAGTTATGTCGACTTTCATCATCCATTTCCAAGCTTGA
TTCCGATTCTGAAAGCTGGCGAGATAAAGCTTCCCGGCGCTCAGTTTCCAACATCAACTG
TCGATGAAGCCTGGCATTCTCTTCGCGTAAAATCTTTTCTTCATTTAGATATAGGCTAAC
TTTTGAATTCCTCTCATTTTGCATTGCTTTAACCTGGCGCCGAAGATAATCAACTTCTTT
CTTCAGATACCTCACATGTGCAGTCAAATTATCACTAGAACCGCTCTCCAGTGACACTGA
TTGGCGAGGCGAGGGCGGTGCACTAACTGGCTGATTTAACTTTTCTTGTAACAGCCTCTT
CTCAGCTTCAAGTTTATCCATCTTTTTCCACAGTCGATTAACAAGACCCTCCTGCTCTTT
TTCTAGAGTATTTTCAAGTTCAATTTTTTCACGTCGAAGTTCTTCAAGCTTGTAGTGTTT
GTCATGGGTTTCACGTTTCAGTTTTTCGATTTTCCTCATTAAGGTGTTTACTTGTTTTTC
CTGTTCCCGTTCCAGCGTTTGCTCTAACTCCACTTTTTCCTGTCGCAATTGACTAAGTTG
CCGTTGCAACTCATTTGTTAAAAATTCCTCTTCAGTTTCATACTTATTTACTAAAGTTTC
CTTTTCCTTCTTCAATTCTTGAATCTTTTTCATTAAAATATTAGAAATGTATTCCTCTTC
TTGTTCGGCCTTTGCTTGTATATTCACGCTTGCTTGACGAAGTGATTTGTTTTCTTCCTG
CAGAGCGTTACATCTTAACTTATAAGTTTCCAATTCCATTTTTAGCACACGGTTTTCTTG
TTGAAGGGACGCAACTCGTATAGCTAGCTCATCCCGCTTTATAGCAACAGCAGCAGCACC
TTGAGTGGAATTCACCCCGTCTGTGTCTGATTCGGATTCAGACATTTTTTTAATACTTTT
GAAGTAAGATAAAACCAATCCGATACACGAAATACTAAATGGCAAAATTAGAAAATTCCT
AAAAAGGGAGCTTGAAATTATT

InterProScan

PANTHER
DUF2046 (IPR019152) - T[33-449] 4.2E-143
Pfam
DUF2046 (IPR019152) - T[36-336] 4.4E-136

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CCDC6_HUMAN 55.919 % 374 3.13E-126