- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S695.g11286.02.t
Possible name(s)
RALGDS; RGL1; RGL2
Gene model
Location
S695 [29,447 / 39,263]
Amino acid sequence
Length: 1,235
>Phmamm.CG.MTP2014.S695.g11286.02.p
MLIELDTISGSGGGRLDFADQTPPMTPLGLSRPDYLPLTKRHTFYPTLPPTPEIIGRERS
YCSLPSRRASNSNAYDVKDPCVKTSDISDARMTRGDAKRSICCSWLVSRWLKVLGKSPPK
HRDVIASNDTVKPENKSDLPVATVTRRRAATVQPHSLFGKENKREWGEERHNDVIYNVML
KRVRRAPSPSSLVSDGLLWETHKVRIIKGATVGYLVSQLCKSFLEDWEEKNFFTVFFATY
RWFAKPADVLEQIKLECDKLKEDTDETRSLLLCSIRRVMRTWIERYFDEDFYDPPHFPLL
HRLLQLAQEVFDDNGHDATCDFIDYVKAKLKSAEVKNLQESAIENLNSPSRFSDLHMETE
DIQVDSEAALNHDASKTLLGSAFSTLQVAEQLTVKDANLFLRVVPHHCLKAVRSSKIKPA
CVRATIDQFNKVVYSVLATCLCTSLKTSQRVKIICKWIEIAQQCRELKNFSSLRAVVSGL
QTHVIHRMRKTWQQVPHSYIELLRELEEINMKDIIMKVGTAKVNTETSSISKVRKDATFR
RNRAIHSGIMHGTVPYLGSFLTDLTYLHTAKPDYVEKGLVNFNKCRKEFEQLAQLQLWQA
SCKGYQHLEPDGKFNEWFNSITPPSDEQAHKLSEQIEPPVVGPTSPSQPATPMKRTISEM
FALHTAIVEPSANGHVLSNHVRNSSDDTSSLNSNKSNGHVPTLDSQSDEERLINVEVIRK
QQESKDGPNPTNWDTIKLSSNDRTAAVIRKALSVFEVDEQLASTFTLVQLLPDDKELHIP
DSSNVFYAMNSSLKEYHFALVEEGVEIQSSMRPVSLQSSPKAGHTPKTKKHHRKTLSTSA
VGQSGPSPMRNFYRHLAMGSMSIASSGSYSPARENQKCELESTEPTNPSPETSARDSNRR
SSNSRRDALTTMDDSVISFALRSVDASDEECDDSWTQRMWKKMHKGHRRQHSDFASHEVI
EQVMMEADGIRPRTSRMVHERPSKSIVLPVQIDEPKEARSESTSTYSRESTSDDSCGRVD
DDAIYANGRLVTWPRNRVASASSASNTWSRRTAVRKHHSDHRPTSGFYRQMSEIEVLEDS
TKRDAELATSSRKSKHAMKRSESRSKFYVTVEGDEGSGSLSKQSSSSSMEPIREVGSPPV
SPVKSPYHRSSSDPCILEYSSSVDEVFKSPPKTRRENTNPQILVECPSPRKVAFNSGWDD
VTINDYVTADVGEDQLDLPKPRSRSSTAESETTHL
Nucleotide sequence
Length: 3,708
>Phmamm.CG.MTP2014.S695.g11286.02.t
ATGTTGATAGAACTGGATACCATAAGTGGTAGTGGTGGTGGAAGGCTGGATTTTGCAGAT
CAAACTCCTCCAATGACACCACTTGGCCTTTCAAGGCCAGATTACTTGCCATTGACCAAG
AGACACACATTTTATCCGACACTTCCCCCGACCCCTGAGATAATTGGTCGTGAGCGTTCT
TATTGTAGCTTGCCCTCCAGGCGAGCATCAAACAGCAATGCGTATGACGTTAAAGATCCG
TGCGTCAAAACGAGTGACATCAGTGACGCACGTATGACGCGCGGCGACGCAAAGCGCTCT
ATATGTTGTTCGTGGCTGGTTTCAAGATGGCTTAAAGTTCTTGGGAAATCACCACCGAAA
CATCGCGACGTCATTGCTTCAAACGACACTGTTAAACCTGAAAATAAATCCGACCTTCCA
GTGGCCACAGTTACGAGAAGACGAGCAGCCACTGTTCAACCACATTCCTTGTTTGGAAAG
GAAAACAAGAGGGAATGGGGCGAAGAACGTCACAATGACGTAATCTACAACGTAATGCTT
AAGCGAGTTCGCCGTGCGCCTTCTCCGTCCAGTTTGGTCTCAGACGGATTACTCTGGGAA
ACCCACAAGGTGCGGATTATCAAGGGTGCTACGGTGGGTTACCTGGTGTCGCAGTTGTGC
AAATCGTTTTTGGAAGACTGGGAAGAGAAGAACTTTTTTACAGTCTTCTTTGCCACGTAC
AGGTGGTTTGCGAAACCAGCCGATGTCCTTGAACAAATCAAACTAGAATGTGACAAGCTC
AAGGAAGACACTGATGAAACTCGCTCACTCCTTTTATGTTCAATTCGACGTGTAATGAGG
ACATGGATTGAAAGATACTTTGATGAGGACTTTTACGATCCTCCTCACTTTCCTCTTCTA
CATCGCTTACTTCAGCTCGCACAGGAGGTTTTTGATGACAACGGTCATGACGCAACGTGT
GACTTCATCGATTACGTCAAAGCAAAACTCAAGTCGGCCGAAGTGAAAAACCTTCAAGAA
TCAGCAATTGAAAATCTCAACTCGCCAAGTCGCTTTTCCGATCTCCACATGGAAACTGAG
GATATCCAGGTCGACTCCGAGGCCGCATTAAACCATGACGCGTCAAAAACTCTCCTCGGA
AGCGCATTTTCTACTTTACAAGTTGCTGAACAACTCACTGTGAAAGATGCTAATTTATTT
CTTCGGGTCGTTCCACACCACTGCCTCAAAGCGGTTCGGTCGTCGAAGATTAAGCCAGCA
TGTGTTCGTGCTACGATCGACCAGTTCAATAAAGTCGTCTACTCTGTGCTCGCCACCTGC
CTCTGCACCTCACTTAAAACCTCGCAACGTGTGAAAATCATATGCAAATGGATTGAAATT
GCCCAGCAATGTCGAGAATTGAAAAACTTTTCCTCGTTACGAGCGGTTGTGTCTGGACTT
CAAACTCACGTGATCCACAGAATGAGGAAAACGTGGCAACAAGTTCCGCATTCCTACATT
GAGCTTCTTCGAGAACTGGAGGAAATCAACATGAAGGACATTATAATGAAGGTGGGCACC
GCTAAAGTCAACACCGAAACAAGTTCAATCAGCAAAGTGCGCAAGGACGCCACCTTCCGA
CGAAATCGTGCCATCCACTCTGGTATTATGCATGGCACTGTTCCCTACCTTGGTTCCTTT
CTCACTGATTTAACGTATCTACATACTGCCAAACCCGACTACGTTGAGAAAGGCCTGGTG
AACTTTAACAAATGTCGCAAAGAATTTGAACAGCTGGCGCAGTTGCAGTTGTGGCAAGCA
TCGTGCAAAGGTTACCAGCATCTTGAACCTGACGGCAAGTTCAACGAATGGTTTAACTCC
ATCACGCCACCAAGCGACGAACAGGCGCACAAGTTATCTGAGCAAATTGAGCCACCAGTA
GTTGGACCAACATCTCCCAGTCAACCTGCAACGCCGATGAAACGTACAATATCAGAGATG
TTTGCCCTACATACAGCGATTGTGGAACCATCAGCAAACGGACATGTCTTATCAAATCAC
GTGAGAAACTCAAGTGACGACACCAGCTCACTGAACAGCAACAAATCCAACGGTCACGTG
CCGACACTTGATTCGCAGTCAGACGAGGAGCGTTTAATCAACGTCGAAGTTATAAGAAAA
CAACAAGAAAGCAAAGATGGCCCAAACCCAACAAACTGGGATACAATTAAGTTGAGTTCA
AACGACCGAACCGCTGCTGTGATTCGAAAAGCTTTGTCGGTTTTTGAAGTCGACGAGCAA
CTCGCTTCTACTTTCACACTGGTCCAATTACTGCCAGATGACAAAGAACTTCATATACCG
GATTCGTCGAATGTATTTTATGCGATGAACAGTTCGCTGAAGGAATATCACTTTGCTTTG
GTCGAGGAAGGAGTCGAAATTCAATCTTCCATGCGTCCTGTTTCTCTGCAATCGTCACCC
AAAGCAGGTCATACACCGAAAACCAAGAAACACCATCGAAAAACCCTCAGTACGTCAGCG
GTCGGCCAATCAGGCCCATCACCAATGCGCAACTTCTACCGCCACCTAGCGATGGGAAGT
ATGTCGATTGCGTCGTCAGGATCATATTCTCCAGCACGCGAAAACCAAAAATGCGAGTTG
GAATCGACCGAGCCGACGAACCCATCGCCCGAAACATCAGCGCGGGATTCGAACCGACGA
TCTTCGAACTCCCGACGGGACGCGTTGACCACTATGGACGACAGTGTGATATCGTTTGCA
TTACGCAGTGTGGATGCAAGTGATGAGGAATGTGACGATTCGTGGACGCAACGCATGTGG
AAAAAGATGCACAAAGGTCATCGTAGGCAACACTCAGATTTCGCATCTCATGAAGTTATT
GAGCAAGTGATGATGGAAGCTGACGGTATCAGACCACGAACAAGCAGAATGGTCCACGAA
CGTCCTTCTAAGTCAATCGTCCTCCCTGTACAAATTGATGAACCCAAGGAAGCCAGATCC
GAATCCACCTCAACCTACAGTCGCGAATCCACATCAGACGACAGCTGTGGCCGCGTAGAC
GATGACGCAATATACGCAAATGGTCGTCTTGTCACGTGGCCTCGGAATCGCGTGGCATCT
GCGTCATCGGCGAGCAATACTTGGTCACGGCGGACGGCTGTACGAAAACACCACAGCGAC
CACCGACCTACCTCCGGATTTTACCGTCAGATGTCAGAGATCGAAGTATTGGAGGACTCA
ACGAAACGCGACGCCGAGTTAGCGACGTCATCACGCAAGAGTAAACACGCAATGAAGCGT
AGCGAGTCAAGGTCCAAGTTTTATGTGACTGTGGAAGGAGACGAAGGTTCGGGAAGTCTC
TCGAAGCAATCAAGTTCTAGTTCGATGGAACCGATCCGTGAAGTTGGGAGCCCTCCGGTT
TCGCCTGTAAAAAGTCCCTACCACCGCTCCTCTAGCGATCCCTGCATCCTTGAATATTCA
TCTTCCGTTGATGAAGTGTTCAAATCTCCTCCCAAAACGCGCCGCGAAAACACGAATCCT
CAAATTCTTGTTGAATGCCCGTCGCCTCGAAAAGTCGCGTTCAACTCAGGGTGGGATGAC
GTCACCATCAACGATTACGTCACCGCTGACGTAGGTGAAGACCAGTTGGATCTTCCGAAA
CCCCGTTCGCGTTCTTCAACGGCGGAAAGCGAAACAACTCATCTCTAA
| SUPERFAMILY |
Ras_GEF_dom_sf (IPR023578) - T[192-656] 4.32E-85 |
| SMART |
Ras-like_Gua-exchang_fac_N (IPR000651) - T[202-330] 1.9E-9 |
| ProSiteProfiles |
Ras-like_Gua-exchang_fac_N (IPR000651) - T[203-330] 18.227 |
| Pfam |
Ras-like_Gua-exchang_fac_N (IPR000651) - T[207-304] 6.1E-9 |
| CDD |
Ras-like_Gua-exchang_fac_N (IPR000651) - T[215-310] 1.70065E-11 |
| Gene3D |
RASGEF_cat_dom_sf (IPR036964) - T[359-640] 9.1E-81 |
| SMART |
RASGEF_cat_dom (IPR001895) - T[382-640] 3.1E-63 |
| CDD |
RASGEF_cat_dom (IPR001895) - T[383-633] 2.3677E-55 |
| ProSiteProfiles |
RASGEF_cat_dom (IPR001895) - T[384-639] 43.919 |
| Pfam |
RASGEF_cat_dom (IPR001895) - T[388-586] 2.0E-45 |
| ProSitePatterns |
Ras_G-nucl-exch_fac_CS (IPR019804) - T[554-584] . |
| SMART |
RA_dom (IPR000159) - T[720-805] 0.002 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[721-799] 3.93E-18 |
| Pfam |
RA_dom (IPR000159) - T[730-798] 2.2E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RGL1_HUMAN | 34.539 % | 293 | 1.06E-84 |
| GNDS_HUMAN | 41.199 % | 207 | 5.23E-55 |
| RGL2_HUMAN | 35.192 % | 173 | 2.39E-44 |