- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C3.213.v1....' >
- Transcript 'Cisavi.CG.ENS81.R44....' >
- Region 'REG00001430' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S6.g00269.01.t
Possible name(s)
ZNF208; ZNF236; ZNF585A
Gene model
Location
S6 [139,695 / 161,841]
Amino acid sequence
Length: 1,484
>Phmamm.CG.MTP2014.S6.g00269.01.p
MFIGRVSTHPDSRMNIQPSDGNEMLLLMNGSLDQFGKNQGSNQQYIQLAPTTESQQYVVQ
SNPTMDLESLGDLLNGQPITFEDGELSVIQRDGQQYIVLPSVSMGQVLNTNELVQPIMQE
TQVVQTTEPTSSRYVQPVEIQTEQTIQPVQQQQTIITNVDYSTPVSNTTCVATLPPTQTV
TQATPTTSKAVDITLLIPSLYPSNTGETSEGDRKLQCIICQFSATTEMELDDHMRKHSVS
APTAPESRKGPFTCTICNVQIAKITAFKRHLKEHSNEKAFKCAQCPEMYNVESNLVLHKA
IHADKGEDGGYKCPTCSRSFMRIASLKSHLPVHLIDETMICTECGDEFTLKSELESHMAQ
HRRDLQKHLSDRTSPFFPVDQVIQQSMEMNPETQRKYRRKANPAKCPFCNKEFRKECQLK
RHILIHTGEKPFACTLCDKAFNQKSALQIHMMMHSGKKPYTCPHCPQNPQSILSMLTEDM
ISASEAHRGKPVAKEDMDVIQQLLRSLDDGDNSNPDSLSITNAESLINQEMDNDIVQQAL
QDSGVDHQRAQDANDSIMTSNIQMMDKNQPLDKQRRSVISGLYLRSSGFSGDHMWKVRKV
DGVRWHQCMFCPKEFKKPSDLVRHIRTHTQERPYKCSKCHKSFAVKTSLTAHERTHLGFR
GYKCQVCLKSFTTSGSLKVHLRMHTGARPFKCTMCDMSFRTTGHRHNHILSHMRGRAHKR
PHKRAKKDLFQMLTTPSHTPLQQPILITESGEELPKETEREKPYSCTQCGKSFISHSILK
AHLTTHTDQLGTEGENPTGSDVTMLKGDTVEFHNDPTLLQVNPNVIQNINKLPQFTVSQQ
THPGEIPAPGTNVDDVIENLEISEDGQITTRTSKSPTGNVECAVSLKKVTNISNKRTCAV
CDEVCENVSSLRDHVKLHNAKEVAEAKKKMVSKRKRTGFYLLSNEQSEILEKTDPSQNMT
LSERILLNAVAEKDRVTQVSNNQRGRFKEFETNGPIHPNVCEFCPKSFRKPSDLARHVRT
HTGDKPYSCDICGKSFTVKSTLVSHQKSHLQRKMFRCHICDMMYAAKSSLKVHMRLHTGA
KPYKCPHCTLTFRTSGHRKNHMTVHLVYPNKTRNANEPEAKIPDPVPVQPVTTTTTPTVQ
STSAPSSQPSVVWPDVTLTVPVDSILGSGLFQQHEGDGSTVPVQLQTHNLQLSTDDPNIT
LQIDPVLLQQTIQESQRTPIQQQHQQQAQQQISNTPAFHPSSNWPAPNVVIQPVNNLCLQ
PHDQPGDSSVPPCDNQVRPSQEINIAVPSSLAGITQQLLQSPIVVANNSNLMETNKNQEL
TLNLNNPAVIQQSNDGQQTQHQASYRIQSPDGGVGTQDLTLTLNSQDLINNQAVQQFMTS
VQQSNDGQQTQHQASYRIQSQDGGVGTQDLTLTLNSQDLINNQGVFTLPTLPLSNEPMQP
QAVATDNQVSMATDLNTFTSHINTEATIMPMVVASSGMETHHNE
Nucleotide sequence
Length: 4,455
>Phmamm.CG.MTP2014.S6.g00269.01.t
ATGTTTATTGGAAGAGTCAGCACCCATCCTGATTCCAGGATGAACATCCAGCCCAGTGAT
GGGAACGAGATGCTGTTGTTGATGAATGGATCACTTGATCAATTTGGAAAGAACCAGGGA
TCAAACCAGCAATATATTCAGTTGGCTCCAACAACAGAATCTCAACAATATGTTGTCCAG
TCTAATCCAACAATGGACTTGGAAAGTCTTGGTGATTTGCTCAATGGTCAACCAATCACA
TTTGAGGATGGAGAGTTGTCTGTGATCCAGCGAGATGGACAACAATATATTGTGTTGCCT
AGTGTTTCAATGGGACAAGTCCTTAACACCAATGAACTTGTGCAGCCTATTATGCAAGAA
ACACAAGTGGTTCAAACCACAGAACCAACATCGAGCAGATATGTCCAGCCAGTTGAGATA
CAAACAGAGCAGACTATCCAACCTGTTCAACAGCAGCAAACTATTATCACCAATGTGGAT
TATTCAACACCAGTATCGAACACTACATGTGTTGCTACCTTGCCACCAACACAGACTGTA
ACACAGGCTACTCCTACCACATCAAAAGCTGTTGATATTACCTTGCTAATTCCATCACTT
TATCCATCAAATACTGGTGAAACATCAGAGGGAGACCGAAAGTTACAGTGTATCATTTGC
CAGTTTAGTGCCACGACTGAAATGGAACTAGATGACCATATGCGCAAACACAGTGTTTCT
GCTCCTACAGCTCCTGAGAGTCGGAAAGGTCCATTTACTTGTACTATATGTAATGTGCAG
ATTGCTAAAATTACAGCATTTAAGCGACATCTTAAGGAACATAGCAACGAAAAGGCTTTT
AAATGTGCCCAGTGCCCAGAAATGTACAATGTTGAAAGCAACCTGGTGTTACATAAAGCT
ATCCATGCAGATAAGGGAGAGGATGGGGGCTACAAATGTCCAACCTGCAGCCGAAGTTTT
ATGAGAATTGCAAGCCTTAAATCTCATCTTCCTGTTCATTTGATTGATGAAACCATGATA
TGTACAGAATGTGGTGATGAATTTACTTTAAAATCAGAACTTGAATCACATATGGCGCAA
CACAGAAGAGACCTGCAGAAACATTTAAGCGACAGAACTTCACCATTTTTTCCTGTTGAT
CAAGTTATTCAGCAAAGTATGGAAATGAATCCAGAAACTCAGAGAAAATATCGTCGCAAG
GCAAACCCAGCAAAATGTCCATTTTGCAACAAAGAGTTTCGCAAAGAATGTCAGTTGAAA
AGACACATTCTAATTCACACTGGTGAGAAGCCATTTGCCTGCACTTTATGCGACAAAGCA
TTTAACCAGAAAAGTGCTCTGCAAATTCACATGATGATGCACTCAGGAAAGAAGCCTTAT
ACTTGTCCACACTGCCCACAAAACCCACAGAGTATATTGTCCATGCTCACAGAAGATATG
ATATCAGCCAGTGAAGCTCATAGAGGAAAGCCTGTTGCTAAGGAGGATATGGACGTCATC
CAGCAGTTGCTAAGGAGTTTGGATGACGGGGACAACTCAAATCCAGATAGCCTTTCTATC
ACGAATGCTGAGAGCCTGATAAACCAGGAGATGGACAATGACATCGTCCAACAAGCTTTG
CAAGATAGTGGTGTTGACCACCAGAGGGCACAAGATGCAAATGATTCAATCATGACATCC
AACATTCAGATGATGGATAAAAATCAGCCCCTTGACAAGCAAAGAAGATCAGTGATCTCC
GGTTTGTACCTCCGTAGCTCTGGGTTCTCTGGCGACCACATGTGGAAAGTTCGCAAGGTT
GACGGAGTGCGATGGCACCAGTGCATGTTTTGCCCCAAGGAGTTTAAGAAGCCCAGCGAC
CTGGTGCGCCACATTCGTACTCACACTCAAGAACGACCTTACAAATGTTCAAAGTGCCAC
AAAAGTTTCGCTGTTAAAACGTCACTCACTGCGCATGAACGAACTCACCTTGGGTTCAGA
GGATACAAATGTCAGGTTTGCCTAAAGTCTTTCACCACATCTGGGAGTTTAAAAGTCCAT
CTTCGCATGCACACTGGAGCTCGACCGTTCAAATGCACAATGTGTGACATGAGTTTTCGT
ACAACCGGTCATCGTCACAACCACATCCTGTCCCACATGAGGGGAAGGGCACATAAACGA
CCACACAAGCGTGCCAAGAAAGACTTGTTTCAAATGTTAACCACACCCAGCCACACCCCT
CTTCAGCAGCCAATCCTAATTACCGAGTCTGGGGAGGAACTTCCGAAAGAAACTGAAAGA
GAGAAACCATATTCGTGCACTCAATGTGGAAAGTCATTTATATCACACAGTATTCTTAAA
GCCCATTTGACTACTCACACTGATCAACTTGGCACTGAAGGGGAAAACCCTACCGGCAGT
GATGTCACAATGCTCAAGGGTGACACAGTCGAGTTTCATAACGACCCAACTTTGCTTCAG
GTCAATCCAAATGTTATCCAAAACATCAACAAACTACCTCAATTTACCGTTAGTCAGCAA
ACACATCCAGGGGAGATTCCCGCACCTGGCACCAACGTAGATGACGTCATTGAAAATTTG
GAGATTTCCGAGGATGGGCAAATAACAACTAGAACAAGCAAGTCACCAACTGGGAATGTA
GAATGTGCGGTGAGTTTAAAAAAGGTTACGAATATCTCTAATAAACGTACATGTGCAGTA
TGTGACGAAGTTTGTGAAAACGTTTCTTCACTTCGGGATCACGTGAAACTTCACAATGCT
AAAGAAGTTGCTGAGGCCAAGAAGAAAATGGTGTCTAAAAGAAAAAGAACTGGCTTTTAC
CTTTTGTCCAATGAGCAGAGCGAAATTCTCGAGAAGACAGATCCAAGTCAAAACATGACG
TTGTCCGAGCGAATCTTGCTTAACGCTGTTGCTGAGAAAGACAGGGTGACACAGGTGAGC
AACAACCAACGAGGAAGGTTCAAGGAGTTTGAGACGAACGGGCCAATTCATCCTAATGTT
TGTGAATTCTGCCCGAAAAGTTTCAGAAAGCCGAGTGACTTGGCTCGTCATGTTCGAACT
CACACCGGGGATAAACCCTACAGTTGCGACATATGCGGAAAATCATTTACAGTAAAATCT
ACGCTTGTTTCGCACCAAAAATCTCATCTTCAGAGAAAAATGTTTCGATGTCATATATGT
GACATGATGTATGCTGCCAAATCAAGTCTAAAGGTTCACATGCGATTACATACAGGTGCG
AAACCTTACAAATGTCCTCACTGCACACTCACGTTTCGTACATCTGGTCATCGTAAGAAC
CACATGACCGTTCATCTGGTTTATCCCAACAAAACAAGGAATGCCAACGAACCAGAAGCG
AAAATTCCTGATCCAGTCCCAGTCCAACCTGTCACCACGACAACAACACCAACTGTCCAA
TCAACAAGTGCCCCGTCATCGCAACCGTCAGTTGTATGGCCAGATGTCACGCTCACCGTA
CCTGTTGACAGTATTCTTGGTAGTGGACTATTTCAGCAACATGAAGGCGATGGCTCCACT
GTTCCCGTCCAGCTTCAGACGCACAACCTCCAACTTTCAACCGACGACCCGAATATCACG
CTTCAAATCGACCCAGTGTTGTTGCAACAAACCATACAAGAATCACAACGTACCCCGATT
CAACAACAACATCAGCAACAGGCTCAACAGCAGATTTCAAATACTCCTGCGTTTCATCCT
TCATCGAACTGGCCGGCTCCAAATGTGGTTATTCAACCGGTCAACAATTTGTGTTTACAA
CCTCACGACCAACCTGGTGACTCTTCAGTGCCACCTTGTGACAACCAGGTTCGGCCTTCA
CAGGAAATCAACATCGCTGTGCCATCGAGTCTTGCTGGAATAACCCAACAGTTGCTGCAG
AGTCCAATAGTTGTTGCAAATAATTCCAATCTGATGGAAACGAATAAAAACCAAGAGCTG
ACGTTGAATCTGAACAACCCAGCTGTGATACAGCAGAGTAATGATGGACAACAAACTCAA
CACCAAGCTAGTTACAGAATACAGAGTCCGGATGGTGGAGTTGGAACACAAGATCTCACA
CTTACTCTAAACTCGCAGGATCTTATCAATAACCAGGCAGTACAACAGTTCATGACGAGT
GTCCAGCAGAGTAATGACGGGCAACAAACTCAACACCAAGCTAGTTACAGAATACAGAGT
CAGGATGGTGGAGTTGGAACACAAGATCTCACACTTACTCTCAATTCGCAAGATCTTATC
AATAACCAGGGGGTATTTACCTTACCAACTTTGCCCCTAAGTAATGAACCGATGCAACCC
CAAGCTGTTGCTACCGACAACCAAGTGTCCATGGCAACCGATCTAAACACGTTTACCTCC
CACATAAACACGGAGGCAACGATTATGCCAATGGTGGTAGCATCTTCTGGAATGGAGACC
CATCATAATGAGTAG
| SMART |
Znf_C2H2_type (IPR013087) - T[215-237] 0.0089 - T[252-274] 0.2 - T[280-302] 0.69 - T[311-333] 0.023 - T[339-361] 0.14 - T[404-426] 0.0057 - T[432-454] 1.3E-4 - T[606-628] 5.9E-4 - T[634-656] 0.0035 - T[662-684] 2.3E-4 - T[690-712] 0.26 - T[764-786] 0.0041 - T[896-918] 0.18 - T[999-1021] 0.003 - T[1027-1049] 4.5E-4 - T[1055-1077] 0.003 - T[1083-1105] 0.0085 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[251-302] 1.96E-10 - T[311-361] 1.33E-9 - T[413-466] 1.57E-18 - T[615-671] 1.9E-16 - T[661-712] 1.64E-12 - T[760-788] 1.21E-8 - T[1007-1062] 5.94E-18 - T[1053-1105] 3.77E-13 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[252-279] 10.263 - T[280-307] 9.889 - T[311-338] 11.281 - T[339-366] 10.221 - T[404-431] 14.191 - T[432-459] 15.313 - T[606-633] 14.295 - T[634-661] 13.568 - T[662-689] 15.334 - T[690-717] 9.224 - T[764-791] 12.695 - T[999-1026] 14.773 - T[1027-1054] 13.692 - T[1055-1082] 13.755 - T[1083-1105] 9.058 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[254-274] . - T[282-302] . - T[313-333] . - T[341-361] . - T[406-426] . - T[434-454] . - T[608-628] . - T[636-656] . - T[664-684] . - T[692-712] . - T[766-786] . - T[898-918] . - T[1001-1021] . - T[1029-1049] . - T[1057-1077] . - T[1085-1105] . |
| Pfam |
Znf_C2H2_type (IPR013087) - T[432-454] 1.4E-4 - T[606-628] 8.3E-5 - T[634-656] 0.0021 - T[662-684] 9.6E-5 - T[1000-1021] 8.1E-5 - T[1027-1049] 2.9E-5 - T[1055-1077] 5.3E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| Z585A_HUMAN | 26.635 % | 214 | 1.45E-57 |
| ZN208_HUMAN | 25.391 % | 254 | 1.11E-68 |
| ZN236_HUMAN | 35.662 % | 357 | 1.22E-100 |