- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S6.g00269.03.t
Possible name(s)
ZNF208; ZNF236; ZNF585A
Gene model
Location
S6 [152,052 / 161,610]
Amino acid sequence
Length: 917
>Phmamm.CG.MTP2014.S6.g00269.03.p
PSDGNEMLLLMNGSLDQFGKNQGSNQQYIQLAPTTESQQYVVQSNPTMDLESLGDLLNGQ
PITFEDGELSVIQRDGQQYIVLPSVSMGQVLNTNELVQPIMQETQVVQTTEPTSSRYVQP
VEIQTEQTIQPVQQQQTIITNVDYSTPVSNTTCVATLPPTQTVTQATPTTSKAVDITLLI
PSLYPSNTGETSEGDRKLQCIICQFSATTEMELDDHMRKHRNEMTEELYKGCKEAFNKRP
VKKSKRGRKKRNTCKFISVSAPTAPESRKGPFTCTICNVQIAKITAFKRHLKEHSNEKAF
KCAQCPEMYNVESNLVLHKAIHADKGEDGGYKCPTCSRSFMRIASLKSHLPVHLIDETMI
CTECGDEFTLKSELESHMAQHRRDLQKHLSDRTSPFFPVDQVIQQSMEMNPETQRKYRRK
ANPAKCPFCNKEFRKECQLKRHILIHTGEKPFACTLCDKAFNQKSALQIHMMMHSGKKPY
TCPHCPQLYTQRGNLRMHVARVHSKISNRFPCEECSCVFKKVGNLNAHITKYHSSTGQQV
EEEGMLTNPQSILSMLTEDMISASEAHRGKPVAKEDMDVIQQLLRSLDDGDNSNPDSLSI
TNAESLINQEMDNDIVQQALQDSGVDHQRAQDANDSISVIPSVSTSTGELTTVSQTVATT
STDGINRENVTSNIQMMDKNQPLDKQRRSVISGLYLRSSGFSGDHMWKVRKVDGVRWHQC
MFCPKEFKKPSDLVRHIRTHTQERPYKCSKCHKSFAVKTSLTAHERTHLGFRGYKCQVCL
KSFTTSGSLKVHLRMHTGARPFKCTMCDMSFRTTGHRHNHILSHMRGRAHKRPHKRAKKD
LFQMLTTPSHTPLQQPILITESGEELPKETETAESENQEKTHKCITCNKSFTKSCHLKQH
LRTHTGEKPYSCTQCGK
Nucleotide sequence
Length: 2,752
>Phmamm.CG.MTP2014.S6.g00269.03.t
GCCCAGTGATGGGAACGAGATGCTGTTGTTGATGAATGGATCACTTGATCAATTTGGAAA
GAACCAGGGATCAAACCAGCAATATATTCAGTTGGCTCCAACAACAGAATCTCAACAATA
TGTTGTCCAGTCTAATCCAACAATGGACTTGGAAAGTCTTGGTGATTTGCTCAATGGTCA
ACCAATCACATTTGAGGATGGAGAGTTGTCTGTGATCCAGCGAGATGGACAACAATATAT
TGTGTTGCCTAGTGTTTCAATGGGACAAGTCCTTAACACCAATGAACTTGTGCAGCCTAT
TATGCAAGAAACACAAGTGGTTCAAACCACAGAACCAACATCGAGCAGATATGTCCAGCC
AGTTGAGATACAAACAGAGCAGACTATCCAACCTGTTCAACAGCAGCAAACTATTATCAC
CAATGTGGATTATTCAACACCAGTATCGAACACTACATGTGTTGCTACCTTGCCACCAAC
ACAGACTGTAACACAGGCTACTCCTACCACATCAAAAGCTGTTGATATTACCTTGCTAAT
TCCATCACTTTATCCATCAAATACTGGTGAAACATCAGAGGGAGACCGAAAGTTACAGTG
TATCATTTGCCAGTTTAGTGCCACGACTGAAATGGAACTAGATGACCATATGCGCAAACA
CAGAAATGAAATGACAGAAGAACTGTACAAAGGTTGTAAGGAAGCTTTCAATAAGAGACC
TGTAAAGAAAAGTAAACGTGGAAGAAAAAAACGGAACACTTGCAAATTTATAAGTGTTTC
TGCTCCTACAGCTCCTGAGAGTCGGAAAGGTCCATTTACTTGTACTATATGTAATGTGCA
GATTGCTAAAATTACAGCATTTAAGCGACATCTTAAGGAACATAGCAACGAAAAGGCTTT
TAAATGTGCCCAGTGCCCAGAAATGTACAATGTTGAAAGCAACCTGGTGTTACATAAAGC
TATCCATGCAGATAAGGGAGAGGATGGGGGCTACAAATGTCCAACCTGCAGCCGAAGTTT
TATGAGAATTGCAAGCCTTAAATCTCATCTTCCTGTTCATTTGATTGATGAAACCATGAT
ATGTACAGAATGTGGTGATGAATTTACTTTAAAATCAGAACTTGAATCACATATGGCGCA
ACACAGAAGAGACCTGCAGAAACATTTAAGCGACAGAACTTCACCATTTTTTCCTGTTGA
TCAAGTTATTCAGCAAAGTATGGAAATGAATCCAGAAACTCAGAGAAAATATCGTCGCAA
GGCAAACCCAGCAAAATGTCCATTTTGCAACAAAGAGTTTCGCAAAGAATGTCAGTTGAA
AAGACACATTCTAATTCACACTGGTGAGAAGCCATTTGCCTGCACTTTATGCGACAAAGC
ATTTAACCAGAAAAGTGCTCTGCAAATTCACATGATGATGCACTCAGGAAAGAAGCCTTA
TACTTGTCCACACTGCCCACAATTATACACTCAACGTGGAAATCTACGGATGCATGTTGC
ACGAGTTCACTCCAAAATAAGCAATCGATTTCCATGTGAGGAATGTTCATGTGTTTTCAA
AAAAGTTGGAAATCTCAATGCCCACATCACAAAGTATCATAGTTCGACTGGACAGCAAGT
AGAGGAGGAAGGAATGTTAACCAACCCACAGAGTATATTGTCCATGCTCACAGAAGATAT
GATATCAGCCAGTGAAGCTCATAGAGGAAAGCCTGTTGCTAAGGAGGATATGGACGTCAT
CCAGCAGTTGCTAAGGAGTTTGGATGACGGGGACAACTCAAATCCAGATAGCCTTTCTAT
CACGAATGCTGAGAGCCTGATAAACCAGGAGATGGACAATGACATCGTCCAACAAGCTTT
GCAAGATAGTGGTGTTGACCACCAGAGGGCACAAGATGCAAATGATTCAATCAGTGTAAT
CCCCAGTGTCTCTACATCAACTGGAGAACTGACCACTGTTAGTCAAACTGTGGCAACAAC
ATCAACTGATGGGATAAACAGGGAAAATGTGACATCCAACATTCAGATGATGGATAAAAA
TCAGCCCCTTGACAAGCAAAGAAGATCAGTGATCTCCGGTTTGTACCTCCGTAGCTCTGG
GTTCTCTGGCGACCACATGTGGAAAGTTCGCAAGGTTGACGGAGTGCGATGGCACCAGTG
CATGTTTTGCCCCAAGGAGTTTAAGAAGCCCAGCGACCTGGTGCGCCACATTCGTACTCA
CACTCAAGAACGACCTTACAAATGTTCAAAGTGCCACAAAAGTTTCGCTGTTAAAACGTC
ACTCACTGCGCATGAACGAACTCACCTTGGGTTCAGAGGATACAAATGTCAGGTTTGCCT
AAAGTCTTTCACCACATCTGGGAGTTTAAAAGTCCATCTTCGCATGCACACTGGAGCTCG
ACCGTTCAAATGCACAATGTGTGACATGAGTTTTCGTACAACCGGTCATCGTCACAACCA
CATCCTGTCCCACATGAGGGGAAGGGCACATAAACGACCACACAAGCGTGCCAAGAAAGA
CTTGTTTCAAATGTTAACCACACCCAGCCACACCCCTCTTCAGCAGCCAATCCTAATTAC
CGAGTCTGGGGAGGAACTTCCGAAAGAAACTGAAACAGCCGAATCTGAGAACCAAGAAAA
AACCCACAAATGCATAACCTGCAATAAATCCTTTACCAAGTCATGTCACTTGAAACAACA
CCTTCGAACACACACAGGAGAGAAACCATATTCGTGCACTCAATGTGGAAAG
| SMART |
Znf_C2H2_type (IPR013087) - T[198-220] 0.0089 - T[272-294] 0.2 - T[300-322] 0.69 - T[331-353] 0.023 - T[359-381] 0.14 - T[424-446] 0.0057 - T[452-474] 1.3E-4 - T[480-503] 0.0033 - T[510-533] 0.14 - T[718-740] 5.9E-4 - T[746-768] 0.0035 - T[774-796] 2.3E-4 - T[802-824] 0.26 - T[882-904] 0.17 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[271-322] 1.12E-10 - T[331-381] 7.44E-10 - T[422-455] 2.93E-8 - T[446-498] 1.37E-17 - T[727-783] 8.79E-17 - T[773-824] 9.37E-13 - T[878-917] 3.28E-12 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[272-299] 10.263 - T[300-327] 9.889 - T[331-358] 11.281 - T[359-386] 10.221 - T[424-451] 14.191 - T[452-479] 15.313 - T[480-504] 9.619 - T[510-538] 9.64 - T[718-745] 14.295 - T[746-773] 13.568 - T[774-801] 15.334 - T[802-829] 9.224 - T[882-909] 16.165 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[274-294] . - T[302-322] . - T[333-353] . - T[361-381] . - T[426-446] . - T[454-474] . - T[482-503] . - T[512-533] . - T[720-740] . - T[748-768] . - T[776-796] . - T[804-824] . - T[884-904] . |
| Pfam |
Znf_C2H2_type (IPR013087) - T[452-474] 8.1E-5 - T[510-533] 0.013 - T[718-740] 4.8E-5 - T[746-768] 0.0013 - T[774-796] 5.6E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN836_HUMAN | 24.703 % | 216 | 1.37E-58 |
| ZN845_HUMAN | 28.743 % | 238 | 8.76E-66 |
| ZN236_HUMAN | 41.728 % | 483 | 6.38E-149 |