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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S8...' > 
  2. Transcript 'KH2012:KH.C5.392.v2....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S7136.g19171.01.t

Possible name(s)

NLRP13; NLRP3; NOD2

Gene model

Phmamm.CG.MTP2014.S7136.g19171

Location

S7136 [1,804 / 2,494]

Sequences

Amino acid sequence

Length: 137

>Phmamm.CG.MTP2014.S7136.g19171.01.p
MDELDLGDNPIGDLGAATMSKCLSNVKSLGLAGGKYVDHGCGITSDGISHITLDLLSLQE
PMDELDLGDNPIGDLGAAAMSKCLSNVKSLGLGGGKYVDHGCGITSNGISHIASGFLSLQ
EPGWGTCGLLAFLLWPP

Nucleotide sequence

Length: 414

>Phmamm.CG.MTP2014.S7136.g19171.01.t
ATGGATGAACTTGACCTTGGTGACAACCCAATTGGTGATCTTGGTGCTGCAACAATGTCA
AAATGTTTGAGCAATGTCAAGTCACTTGGTTTGGCTGGTGGCAAATATGTTGACCATGGT
TGTGGAATAACGTCCGATGGAATTTCTCATATCACTTTAGATTTGCTGTCACTCCAAGAA
CCGATGGATGAACTTGACCTTGGTGACAACCCAATTGGTGATCTTGGTGCTGCAGCAATG
TCAAAATGTTTGAGCAATGTCAAGTCACTTGGTTTGGGTGGTGGCAAATATGTTGACCAT
GGTTGTGGAATAACGTCCAATGGAATTTCTCATATCGCTTCAGGTTTTCTGTCACTCCAA
GAACCGGGGTGGGGAACATGTGGCCTGCTTGCCTTTTTATTGTGGCCCCCGTAA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[1-122] 9.9E-17
Pfam
Leu-rich_rpt (IPR001611) - T[3-17] 0.13 - T[64-80] 0.034

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value