Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S716.g11447.01.t

Possible name(s)

SSR4

Gene model

Phmamm.CG.MTP2014.S716.g11447

Location

S716 [35,584 / 37,766]

Sequences

Amino acid sequence

Length: 179

>Phmamm.CG.MTP2014.S716.g11447.01.p
AYLVFGIIMGFQRLINFAFIFVLFGGATANTCVQPTPSFSHYTSNNEKLSQSSAVVVEFT
LKCKNKVDDLLLFADVEGTQIPVTKSPEGNNFQVSWTSSSLVQASKMYKVRFFDEEGYSN
LRKAIRSSQDINSVKELFQVEFKHPGLSSKLWIRSELLALIVATIVFYVVCKERSEVIA

Nucleotide sequence

Length: 627

>Phmamm.CG.MTP2014.S716.g11447.01.t
GGCTTATCTGGTTTTTGGAATTATCATGGGTTTCCAGCGTTTGATCAACTTTGCTTTTAT
TTTTGTACTATTTGGAGGTGCAACAGCAAACACTTGCGTACAGCCAACTCCCTCCTTTTC
ACATTACACAAGCAACAATGAAAAATTAAGTCAAAGTTCAGCGGTTGTTGTTGAATTTAC
ACTTAAATGCAAAAACAAGGTTGATGATTTGCTGCTGTTTGCTGATGTTGAGGGAACACA
AATTCCAGTCACAAAATCCCCAGAAGGAAATAACTTTCAAGTTAGCTGGACTAGCAGTTC
TTTAGTCCAAGCAAGCAAAATGTACAAAGTTAGATTCTTTGATGAGGAAGGCTACTCTAA
TCTGAGAAAAGCAATCAGAAGCTCCCAGGATATAAATTCTGTGAAAGAACTGTTTCAGGT
TGAATTTAAACATCCGGGTCTCTCATCAAAATTATGGATTCGTTCAGAGTTGCTTGCTCT
GATTGTGGCAACTATTGTTTTCTATGTGGTCTGCAAAGAACGAAGCGAAGTTATAGCATG
AGATTGATTTGTATCTTTTCATTGATGCAGTAATTTGAAGTTCACTAATATCACTATTAC
ACTGTTTGGTTACCTACAAATTGCAGA

InterProScan

PANTHER	TRAP-delta (IPR008855) - T[15-177] 4.5E-53
Pfam	TRAP-delta (IPR008855) - T[19-177] 1.4E-52

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SSRD_HUMAN	37.162 %	120	5.47E-35