Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S734.g11580.01.t

Possible name(s)

TMED10; TMED4; TMED9

Gene model

Phmamm.CG.MTP2014.S734.g11580

Location

S734 [68,200 / 69,218]

Sequences

Amino acid sequence

Length: 192

>Phmamm.CG.MTP2014.S734.g11580.01.p
MYITISITCVLAFIAVQAEALNFQLPADTEKCLREEIHKDVLVTGDYDVSQQASVKVFLK
VTDSNGHILYQKDEATQGKFAFTTDDYDMFQICFSSKADFKGKLPPQDVELQIKRGVEAK
NYDDIAKTEKLKPLEVELRRLEDLSESIVNAFAYMKKREEEMRDTNGVPNLFTISYHLDA
LYCHAYHFLQNN

Nucleotide sequence

Length: 579

>Phmamm.CG.MTP2014.S734.g11580.01.t
ATGTATATCACAATTTCTATTACTTGCGTGTTGGCATTTATTGCTGTTCAAGCAGAAGCC
CTCAATTTTCAACTGCCAGCAGATACTGAAAAATGTTTGCGCGAAGAAATACACAAAGAT
GTTTTGGTTACAGGAGATTATGATGTCAGTCAGCAAGCTTCAGTAAAAGTATTTCTCAAG
GTTACAGATTCCAATGGACATATTCTTTATCAAAAAGATGAGGCAACACAGGGAAAATTT
GCTTTTACTACTGATGATTATGATATGTTTCAAATTTGCTTTTCTAGTAAAGCAGACTTT
AAAGGAAAGTTGCCCCCACAAGATGTGGAACTGCAAATAAAACGTGGAGTGGAAGCAAAG
AACTATGATGATATTGCTAAAACTGAAAAGTTAAAACCTCTGGAAGTAGAACTACGAAGA
CTTGAGGACCTATCAGAATCAATTGTTAATGCATTTGCTTACATGAAAAAAAGAGAAGAA
GAAATGAGAGACACAAATGGGGTTCCCAACCTTTTTACTATCTCGTACCACTTGGACGCT
CTGTACTGCCATGCGTACCACTTCTTGCAAAACAATTAA

InterProScan

PANTHER	TMP21-related (IPR015720) - T[6-166] 1.2E-57
Pfam	GOLD_dom (IPR009038) - T[20-166] 2.0E-35
SMART	GOLD_dom (IPR009038) - T[20-173] 2.8E-34
ProSiteProfiles	GOLD_dom (IPR009038) - T[30-180] 16.544

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TMEDA_HUMAN	62.5 %	217	4.38E-72