- Transcript 'Phmamm.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S743.g11653.01.t
Possible name(s)
SF3A1; SFSWAP
Gene model
Location
S743 [57,291 / 73,695]
Amino acid sequence
Length: 889
>Phmamm.CG.MTP2014.S743.g11653.01.p
MQSGYIRAPRRLPSGNDNKSHMHRGPHAKQILKKSSRQPPNDDEMLVFGYASKLYPPDSN
SAVISKNKHLILWNGDEEVDIKIDRYDCRASLYDLSEFDGDSWNKTYQQSEEETRLEEKL
DEERYRALKINEMEENVRQEEEMKRLHASISSNPYQQVGFKYGDEYDPSVPTTDTTDVEE
SVTDDKPFIAPTSLAVPTEMEIPPTEKMNAIIEKTATFVSKQGTQMEIVLKAKQSNNSQF
QFLQFGHYLNPYYKHMVKRIRDGKYCPGAKDNEQDSNEDSDSSSDGEGYLHPSLFAAAHK
QNQKEKDEKTKAIRTIDPEHPLAKLIEKGRAANAAKQYQQMVDTVYSYYHQQNTESANGG
TQQVEPPPLPMFETMSSQFSTDMVLPQPHYPETPAPPGEEAPGSIAPPPLTLPPHMTTGE
EQLVPPSPDMQPIVEAVARKIATEGEEVEMSLATQDNPNYAFLRPWHELHPYYKYRKTAW
LRLLNPPPPPETKEAELSIPPETPEESPDKTEELKPSAPISFSIKPRSESSNKILATVDS
KTSKILAEPESDGKEIVLKVENVETRKVRRKFTEEAPPGKFMSAPKSPPGRSPTITEDIQ
HAPTEIGKICDETQPQVESLIEPQTQVVPPIQPSPPSPPPKPASNFTAVTSTGEAASVSL
LRQKQAARRMKALQFLKAKQKQEPVVENTEQIVQTNPANEDIFDLSSSPKPEPISPEKEN
SPDLSNVAPSSTDQTNNPKTSDPTPADTSPAPQRHRSSKGHHSSPLTSDKSSSFQHREIP
SAYRQENREKSLERDRRSHKRSSKHRSRTGSSSPGRKHKRSRKHVNSKFGERKKKKRKKE
KSRKSVESDEPEDGQISDRHSHGESPKCEPDLTEETNKDARSIVDVTKP
Nucleotide sequence
Length: 2,829
>Phmamm.CG.MTP2014.S743.g11653.01.t
GGGATTTCGTGTTTTCAACAAAACTTTTGTTTAATAATGGTTAACGTGTAGACGTAAATT
ACAAATGTTTGTTGGGAAAGTAACAAGAGAGAAAGGTTGCATCGAGCAGGGAAAATTGCC
TAATCTTGGGCATAATTTTCCGTAATCTCGCAACGCAAGCATGCAATCTGGATATATTCG
GGCACCTCGAAGGTTGCCCAGCGGCAATGACAATAAATCACACATGCATCGAGGTCCTCA
TGCAAAACAAATTCTCAAGAAATCCTCTCGACAACCACCCAATGATGATGAAATGCTTGT
GTTCGGTTACGCAAGCAAGCTCTATCCTCCAGATTCAAACTCTGCCGTAATCTCCAAAAA
CAAACACCTGATTCTTTGGAACGGCGACGAAGAAGTTGACATTAAAATCGACAGATATGA
CTGCCGAGCATCGTTATATGATCTCTCTGAATTTGACGGTGATTCATGGAACAAAACTTA
TCAGCAATCCGAGGAGGAGACACGACTTGAGGAGAAACTTGATGAGGAAAGATACAGAGC
GCTAAAAATTAATGAGATGGAAGAAAATGTCAGACAAGAAGAAGAAATGAAACGACTTCA
CGCTTCAATTTCATCAAACCCCTACCAACAAGTTGGTTTCAAGTACGGTGATGAGTATGA
CCCATCCGTTCCCACAACAGATACCACTGATGTAGAGGAAAGTGTCACTGATGACAAACC
CTTCATAGCTCCAACTTCCCTCGCTGTGCCCACAGAAATGGAAATTCCTCCAACGGAAAA
GATGAATGCCATTATTGAGAAGACTGCAACATTTGTTAGCAAGCAAGGAACTCAAATGGA
AATTGTTCTGAAAGCAAAACAATCAAATAACTCTCAGTTTCAGTTTTTGCAGTTCGGCCA
TTATCTCAATCCCTACTATAAACATATGGTGAAACGAATCAGAGATGGAAAATATTGTCC
GGGTGCGAAAGACAACGAGCAAGACAGCAATGAGGACTCGGACAGTTCAAGTGACGGAGA
GGGTTATTTACATCCCAGTCTATTTGCGGCTGCACACAAACAAAATCAAAAGGAAAAGGA
TGAAAAAACAAAAGCAATTCGAACTATTGACCCCGAACATCCACTTGCAAAGTTGATTGA
GAAAGGGCGAGCTGCAAACGCGGCCAAGCAATATCAGCAGATGGTTGACACTGTGTACAG
CTACTATCATCAACAAAACACAGAATCAGCCAACGGCGGAACGCAGCAAGTTGAACCCCC
TCCACTGCCCATGTTTGAAACAATGTCGTCTCAGTTTTCAACAGATATGGTACTTCCCCA
GCCCCACTACCCTGAAACCCCCGCACCCCCAGGTGAAGAGGCCCCGGGTAGTATAGCTCC
TCCCCCTTTAACCCTTCCTCCCCACATGACCACAGGAGAGGAGCAACTCGTACCTCCTTC
CCCTGATATGCAGCCGATCGTGGAAGCAGTGGCAAGGAAAATAGCTACAGAAGGGGAAGA
AGTTGAAATGTCACTCGCAACACAAGATAACCCAAACTATGCGTTTCTACGTCCCTGGCA
CGAACTCCATCCTTACTACAAGTATCGGAAAACAGCTTGGTTACGCTTGCTTAACCCACC
CCCTCCTCCAGAAACAAAAGAGGCAGAATTGTCCATTCCTCCTGAAACTCCTGAGGAAAG
CCCAGATAAGACTGAAGAACTCAAACCATCAGCCCCGATATCTTTCTCAATCAAACCGAG
AAGCGAATCGAGCAACAAAATACTTGCGACCGTCGACAGCAAAACAAGCAAAATCCTCGC
TGAGCCAGAAAGTGATGGAAAAGAAATAGTTTTAAAAGTTGAAAACGTGGAAACACGAAA
AGTTCGAAGAAAATTTACAGAAGAAGCCCCACCAGGAAAATTCATGTCGGCTCCGAAATC
CCCTCCAGGGAGATCCCCTACTATCACAGAAGACATCCAACATGCACCAACGGAAATTGG
AAAAATTTGTGATGAAACCCAACCCCAGGTGGAATCCCTCATCGAACCCCAAACCCAGGT
TGTTCCCCCGATCCAACCCTCACCCCCCTCTCCACCACCGAAGCCAGCTTCAAACTTTAC
AGCCGTAACTTCCACGGGTGAAGCCGCTTCTGTATCGCTCCTTCGACAGAAACAAGCAGC
AAGAAGAATGAAAGCTTTGCAATTCTTAAAAGCCAAACAGAAACAGGAACCAGTGGTGGA
AAATACTGAACAGATCGTCCAAACAAATCCAGCCAATGAAGATATTTTTGATCTTTCATC
GTCACCGAAGCCGGAACCGATTTCTCCCGAAAAAGAAAATTCACCCGATTTATCGAACGT
CGCTCCCTCATCAACCGACCAAACAAACAATCCCAAAACATCCGACCCAACTCCAGCTGA
TACGAGCCCCGCACCACAACGTCATCGGTCAAGTAAAGGTCACCACTCTTCACCTTTGAC
CTCTGATAAATCAAGCTCCTTTCAACATAGGGAAATCCCCTCTGCATATCGTCAGGAAAA
CAGAGAAAAATCACTGGAGCGTGACAGAAGATCCCACAAACGAAGCAGCAAGCACAGATC
GCGAACCGGTTCCTCCTCACCTGGTCGTAAACACAAACGATCCCGTAAACACGTGAATAG
CAAATTCGGCGAGCGAAAGAAAAAGAAAAGAAAAAAAGAGAAAAGTCGCAAGTCTGTTGA
AAGCGACGAACCAGAAGACGGACAGATTTCCGACCGACATTCTCATGGAGAATCCCCAAA
GTGCGAACCCGATCTGACGGAAGAAACAAACAAAGATGCTCGGTCTATTGTTGACGTCAC
AAAGCCAGA
| SMART |
SWAP_N_domain (IPR019147) - T[43-166] 2.3E-41 |
| Pfam |
SWAP_N_domain (IPR019147) - T[45-164] 1.8E-23 |
| SUPERFAMILY |
SWAP/Surp_sf (IPR035967) - T[183-260] 9.81E-22 - T[411-479] 1.07E-11 |
| Gene3D |
SWAP/Surp_sf (IPR035967) - T[204-262] 6.4E-26 - T[428-482] 2.4E-12 |
| SMART |
Surp (IPR000061) - T[209-262] 7.2E-17 - T[431-482] 8.1E-8 |
| ProSiteProfiles |
Surp (IPR000061) - T[211-253] 15.678 - T[433-473] 11.966 |
| Pfam |
Surp (IPR000061) - T[211-258] 7.2E-15 - T[433-476] 1.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SFSWA_HUMAN | 36.727 % | 268 | 2.3E-76 |