Aniseed - Transcript Card

Clone 'AJ494533' >
Transcript 'Haaura.CG.MTP2014.S8...' >
Transcript 'Phmamm.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S756.g11729.01.t

Possible name(s)

CDC42EP1; CDC42EP2; CDC42EP3

Gene model

Phmamm.CG.MTP2014.S756.g11729

Location

S756 [37,417 / 38,843]

Sequences

Amino acid sequence

Length: 293

>Phmamm.CG.MTP2014.S756.g11729.01.p
MPAKAPIYLKPGGGKNGHGNGKGGKKLRELLSTDMISPPLGDFRHMAHVGRGGSMDMFGD
TSFLQQKNASSDNTESHNNETVPKVVAEGLATMRRNGSFGKKSAKKQRNLSTPDEASMKA
DVKSLSTQSYDGYGPAESPILQTAFSLPLLNQEQSTSTPSSPTSEGGKKTKSKGKKTMNN
NCISNGKTHSQEKLPITSTPNVTVDGPPKPRRIMSNEEDSTLANGNHVVGNGMPTDKLSP
LRRSSEVYTQKPDGLLPVVATYSDSTSLSEGWELDLGESLMDDVMGIMDRIEL

Nucleotide sequence

Length: 882

>Phmamm.CG.MTP2014.S756.g11729.01.t
ATGCCCGCCAAGGCACCGATCTACCTGAAGCCAGGCGGCGGGAAAAACGGGCACGGAAAC
GGGAAGGGAGGAAAGAAACTACGCGAGCTGCTCTCCACTGACATGATTTCACCCCCGCTG
GGCGATTTCAGACACATGGCTCATGTCGGACGCGGCGGTTCGATGGACATGTTTGGTGAT
ACTTCTTTTTTACAGCAAAAAAATGCCTCATCGGATAACACGGAGTCACATAACAATGAA
ACCGTCCCCAAGGTGGTAGCAGAAGGCTTGGCCACTATGAGGCGCAATGGCAGTTTTGGG
AAAAAATCAGCGAAAAAACAAAGAAATTTAAGCACACCTGACGAGGCCAGCATGAAAGCT
GATGTTAAGTCTCTTTCCACGCAATCCTACGACGGTTACGGCCCAGCGGAGTCGCCTATT
CTTCAAACTGCCTTTTCGTTGCCTTTGCTAAACCAGGAACAAAGCACCTCCACTCCATCA
TCGCCCACCAGTGAAGGCGGGAAGAAGACAAAGTCGAAAGGCAAGAAAACTATGAACAAC
AACTGCATCAGCAACGGCAAGACCCACAGTCAAGAAAAACTCCCAATTACATCAACGCCC
AATGTAACCGTGGACGGACCGCCAAAACCACGACGCATTATGTCAAACGAGGAGGACTCC
ACATTGGCTAACGGCAATCACGTGGTTGGCAACGGCATGCCAACAGACAAGTTGAGCCCT
CTACGTCGTTCGTCCGAAGTTTACACCCAAAAACCTGACGGATTGCTGCCCGTTGTAGCC
ACGTACAGTGACAGTACATCACTGTCTGAGGGCTGGGAACTTGACCTTGGAGAGTCCTTG
ATGGATGACGTCATGGGAATCATGGACAGGATCGAGTTGTAA

InterProScan

Pfam	CRIB_dom (IPR000095) - T[35-69] 1.4E-5
SMART	CRIB_dom (IPR000095) - T[36-72] 1.3E-5
ProSiteProfiles	CRIB_dom (IPR000095) - T[36-50] 9.014
Pfam	Cdc42_effect (IPR029273) - T[140-290] 3.1E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
BORG1_HUMAN	38.272 %	82	1.12E-18