- Transcript 'Phmamm.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S7588.g19240.01.t
Possible name(s)
CD209; CLEC17A; CLEC4M
Gene model
Location
S7588 [433 / 1,396]
Amino acid sequence
Length: 231
>Phmamm.CG.MTP2014.S7588.g19240.01.p
MKFLIWVLINVVVKVLSHAENDEILVCKTARSLWTSPAYNMSSMQGRPGKQGPPGNPGPV
GPSGPPGHVGLPGPRGQPGIQSTKRISNVEQKLRTLTGSVWKPILKQYHVRTTLSSWQEA
RTYCQSIGGDLVTSGMRDPQTRKDIIEHLVKPHGPQYYWIGLSDIDVEGSWKWVDGVMAT
EENTHWASGEPNNSGGGSPPVDCGHIGPNQYLMDDHSCHRNQRAICERTAP
Nucleotide sequence
Length: 696
>Phmamm.CG.MTP2014.S7588.g19240.01.t
ATGAAGTTTTTGATTTGGGTATTAATCAACGTAGTTGTAAAAGTGTTGTCTCACGCTGAA
AATGATGAAATTCTTGTTTGCAAAACTGCAAGATCTTTGTGGACATCTCCTGCATACAAT
ATGTCTTCAATGCAGGGAAGGCCGGGAAAGCAAGGACCTCCAGGAAATCCGGGACCCGTG
GGTCCATCCGGTCCACCTGGCCATGTTGGTCTGCCTGGGCCTAGGGGTCAGCCTGGAATA
CAATCTACAAAACGTATCTCAAATGTAGAACAGAAACTGCGAACTTTAACAGGGTCAGTT
TGGAAACCAATTCTGAAGCAATACCACGTCCGTACCACTCTGAGCTCATGGCAAGAAGCC
AGAACATATTGTCAATCCATTGGTGGTGATTTGGTGACAAGTGGAATGAGAGATCCACAA
ACACGCAAAGATATCATAGAGCACTTGGTAAAGCCACACGGGCCGCAGTATTATTGGATC
GGTCTGAGCGACATCGACGTTGAAGGAAGCTGGAAGTGGGTTGATGGTGTCATGGCCACA
GAGGAAAATACACATTGGGCATCAGGTGAGCCCAACAATAGTGGGGGCGGAAGTCCGCCA
GTGGATTGCGGACACATCGGCCCGAACCAATACCTTATGGACGATCATTCTTGCCATAGA
AATCAACGCGCTATTTGTGAAAGAACAGCTCCGTGA
| Pfam |
Collagen (IPR008160) - T[45-79] 1.1E-6 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[79-230] 4.3E-30 |
| SMART |
C-type_lectin-like (IPR001304) - T[95-227] 5.0E-15 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[101-229] 2.45E-28 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[108-227] 18.65 |
| Pfam |
C-type_lectin-like (IPR001304) - T[115-228] 2.4E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|