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  1. Transcript 'Phmamm.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S770.g11841.01.t

Possible name(s)

RFC2; RFC4; RFC5

Location

S770 [60,362 / 62,834]

Sequences

Amino acid sequence

Length: 326

>Phmamm.CG.MTP2014.S770.g11841.01.p
MSELNLPWVEKYRPKSLDDLISHEDILKTIRRFMAEDRLPHLLFYGPPGTGKTSTILACA
KQLYSVKEFNSMVLELNASDDRGIGIVRNQILSFASTRTIFNKGFKLIILDEADAMTKDA
QNALRRVMEKFTENTRFCLICNYLTKIIPAIQSRCTRFRFGPLSTDQMKPRLEHVIEQES
LKITEDGMTAVVTLACGDMRKALNVLQSTSMAHDEVNENTVYTCTGHPKKSDIENILEWM
LNKDFTSAYRKVIALKTENGMALQDILLQVHIYVHRIDFPLDVRILLLDKLANIEERLAA
GTNEKIQTSSLIAAFQQAKNMTAANA

Nucleotide sequence

Length: 981

>Phmamm.CG.MTP2014.S770.g11841.01.t
ATGTCTGAATTAAATTTACCCTGGGTGGAGAAATACCGCCCCAAATCATTAGATGACCTA
ATTTCCCATGAAGACATTCTTAAGACTATTCGCCGTTTTATGGCTGAAGATCGTTTGCCA
CATCTTCTATTCTATGGACCACCAGGAACAGGAAAAACTTCGACTATTTTGGCCTGCGCA
AAGCAACTTTATTCTGTAAAGGAATTTAATTCGATGGTTCTGGAACTTAATGCTTCAGAT
GACAGGGGAATTGGTATTGTTAGAAATCAGATTTTAAGCTTTGCAAGCACTCGCACAATT
TTCAACAAAGGTTTTAAATTAATTATTCTGGATGAAGCTGATGCCATGACAAAGGATGCT
CAAAATGCCCTGAGACGTGTGATGGAAAAATTTACAGAAAATACCAGATTTTGTTTAATT
TGCAACTACCTTACTAAGATCATACCTGCTATACAGTCACGATGTACAAGGTTCCGCTTT
GGACCTTTGTCAACAGATCAGATGAAGCCTAGATTGGAACATGTCATTGAGCAGGAATCA
CTTAAAATTACTGAAGATGGCATGACTGCTGTTGTCACGCTTGCATGTGGTGATATGAGA
AAAGCCTTGAACGTTTTGCAAAGCACATCAATGGCTCATGATGAAGTAAACGAAAACACT
GTTTATACATGTACAGGACATCCGAAAAAGTCTGACATTGAAAACATTTTGGAGTGGATG
TTAAACAAGGACTTTACCTCTGCTTATCGAAAGGTTATTGCACTGAAAACAGAAAATGGA
ATGGCACTGCAGGACATTCTGCTGCAAGTTCATATATATGTTCATCGCATTGACTTTCCA
TTGGATGTACGAATCCTTTTGTTGGACAAATTAGCAAACATTGAGGAAAGGCTCGCTGCT
GGTACAAATGAAAAAATTCAAACCAGCTCACTTATAGCTGCTTTCCAACAGGCAAAGAAT
ATGACTGCTGCCAATGCCTAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[5-223] 6.04E-52
SMART
AAA+_ATPase (IPR003593) - T[38-166] 1.8E-12
Pfam
ATPase_AAA_core (IPR003959) - T[42-159] 8.8E-17
Pfam
Rep_factorC_C (IPR013748) - T[228-314] 7.8E-21
SUPERFAMILY
DNA_pol3_clamp-load_cplx_C (IPR008921) - T[228-319] 4.25E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RFC2_HUMAN 38.658 % 219 4.23E-69
RFC4_HUMAN 38.941 % 235 3.13E-75
RFC5_HUMAN 74.224 % 518 0





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