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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S791.g11975.01.t

Possible name(s)

RPS11

Location

S791 [28,719 / 31,245]

Sequences

Amino acid sequence

Length: 152

>Phmamm.CG.MTP2014.S791.g11975.01.p
KVLSLFSFTMADSAQTERAFQRQPTVFVNRKRVLTGDKKKLRHVKSIGLGFKTPRYAVEG
NYIDKKCPFTGNVLIRGRILTGAVIKLKMQRTIVIRRDFLHYIPKYNRFEKRHKNMSVHL
SPCFRDVQLGDLATVGECRPLSKTVKFNVIKI

Nucleotide sequence

Length: 457

>Phmamm.CG.MTP2014.S791.g11975.01.t
AAAGTTCTTTCCCTCTTTTCCTTCACCATGGCTGATTCGGCGCAGACTGAGAGAGCGTTC
CAGAGGCAACCAACCGTTTTTGTCAACCGCAAGAGGGTGTTAACGGGCGACAAGAAAAAG
CTCAGACATGTGAAGAGCATTGGGTTGGGATTTAAGACACCAAGATATGCTGTTGAAGGT
AATTACATCGACAAGAAGTGCCCTTTCACTGGCAATGTCTTGATTCGAGGTCGAATTCTG
ACTGGTGCAGTCATCAAACTGAAGATGCAGCGTACAATTGTGATCCGTAGGGATTTCCTG
CACTACATCCCAAAGTACAACCGTTTCGAGAAGCGTCACAAAAACATGTCTGTTCATTTG
TCTCCATGCTTCAGGGATGTACAACTTGGTGATTTGGCAACAGTTGGTGAATGCAGACCC
CTCAGCAAAACGGTGAAATTCAATGTGATCAAGATCG

InterProScan

PANTHER
Ribosomal_S17/S11 (IPR000266) - T[10-151] 6.6E-67
Pfam
Ribosomal_S11_N (IPR032440) - T[15-80] 7.9E-31
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[76-152] 3.51E-26
ProDom
Ribosomal_S17/S11 (IPR000266) - T[78-147] 2.0E-31
Pfam
Ribosomal_S17/S11 (IPR000266) - T[82-151] 1.2E-24
PRINTS
Ribosomal_S17/S11 (IPR000266) - T[96-119] 2.6E-12 - T[130-140] 2.6E-12 - T[140-147] 2.6E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS11_HUMAN 77.397 % 233 3.46E-80