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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.311.v1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Transcript 'KH2012:KH.C11.371.v1...' > 
  4. Region 'REG00001228' > 
  5. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S800.g12032.02.t

Possible name(s)

ATP5F1D

Gene model

Phmamm.CG.MTP2014.S800.g12032

Location

S800 [8,077 / 10,579]

Sequences

Amino acid sequence

Length: 154

>Phmamm.CG.MTP2014.S800.g12032.02.p
MIAQPRLIRNYAEAAAAPVAQPGQMVFTFAAPDEAYYQESNKVKQVDVPTGTGFIGILAS
HVPTFGVLKPGVLTVMESEGAVNKYFVSSGTYAINEDSTVQINAEEAVPIDALDKELAKS
CLHKAQSELSSASTDIEKAEAQVAIQTYEEILAA

Nucleotide sequence

Length: 465

>Phmamm.CG.MTP2014.S800.g12032.02.t
ATGATTGCCCAACCCCGATTAATTCGAAATTATGCTGAAGCTGCAGCAGCTCCTGTTGCG
CAGCCAGGACAGATGGTTTTCACATTCGCTGCACCTGATGAGGCTTATTATCAAGAGAGC
AACAAAGTCAAGCAAGTTGATGTACCAACTGGAACAGGATTTATTGGTATTTTGGCAAGC
CATGTGCCCACATTTGGTGTCTTGAAACCTGGCGTTCTAACAGTAATGGAATCAGAAGGA
GCAGTTAACAAATACTTCGTGAGTAGCGGTACTTATGCTATTAATGAGGACTCTACAGTT
CAAATAAACGCTGAAGAAGCTGTACCAATTGATGCTCTGGATAAGGAGCTTGCAAAGTCG
TGTTTACATAAAGCACAATCTGAGCTGTCATCTGCATCTACTGACATTGAAAAAGCAGAG
GCACAAGTTGCAATCCAAACTTATGAGGAAATACTTGCAGCATGA

InterProScan

PANTHER
ATP_synth_F1_dsu/esu (IPR001469) - T[4-151] 2.0E-40
Gene3D
ATPsynth_dsu/esu_N (IPR036771) - T[10-113] 3.2E-35
Hamap
ATP_synth_F1_dsu/esu (IPR001469) - T[23-154] 13.778
CDD
ATP_synth_F1_dsu/esu (IPR001469) - T[25-149] 1.74266E-29
SUPERFAMILY
ATPsynth_dsu/esu_N (IPR036771) - T[25-108] 2.88E-16
ProDom
ATP_synth_F1_dsu/esu_N (IPR020546) - T[30-113] 1.0E-20
Pfam
ATP_synth_F1_dsu/esu_N (IPR020546) - T[30-107] 3.9E-12
SUPERFAMILY
ATP_F1_dsu/esu_C_sf (IPR036794) - T[112-152] 2.07E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATPD_HUMAN 50.376 % 133 1.35E-40