- Transcript 'KH2012:KH.C1.1119.v1...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S807.g12072.01.t
Possible name(s)
LHCGR; RXFP1; RXFP2
Gene model
Location
S807 [30,224 / 37,404]
Amino acid sequence
Length: 445
>Phmamm.CG.MTP2014.S807.g12072.01.p
MRDVITATSCDGEIECPLREDECAHCLNQNTMLCNISSQSAESNLLANSSEEDGSMEEIS
PDEVCDGKEDCEDGSDEVGCDDRFYCSALNGSRVSISNDLVCDEVINCDAREDESDCFAD
KRFYCTGGVPYFVTRLHVQDGVGDCVDWSDECSNFTPNVNSYLSSTQYLIKNQFLGVLVL
TMAALAVLGNVVVIYGEACFLRNLVTKRDVSASLRANHMLVLNLAVADFLMGVYLSVLGV
TNRLYSGKFCILKRWWLTSDLCVALGVLVVLSSQTSVFTMLALTATRVHSVFRPIGSLNK
PSFQVVMQTMLCTWGISLTLALIPLSGIKQSSFYYLAQIERNPVFNDDVITFKEAKEYVI
NLVTYLRDLQSLTLDEARYYSCNTVCLPQVFVTKDFDSWKFSLTISIVNFLSFVLVAVLH
ILIAAKIRKSTVRSNRGQRHNRGNP
Nucleotide sequence
Length: 1,338
>Phmamm.CG.MTP2014.S807.g12072.01.t
ATGCGTGATGTCATCACAGCAACATCATGTGACGGTGAAATCGAATGCCCGCTGCGTGAA
GATGAGTGCGCGCATTGTTTGAATCAAAACACAATGCTCTGCAATATTTCGTCACAATCG
GCTGAATCTAATTTGCTGGCGAACAGTTCAGAGGAAGATGGTTCAATGGAGGAGATTTCG
CCTGACGAGGTTTGCGATGGAAAAGAAGATTGCGAGGATGGGAGTGATGAAGTCGGATGC
GACGATAGATTTTACTGCTCTGCATTGAACGGATCTCGGGTTTCGATATCAAACGACCTT
GTTTGTGACGAAGTCATCAATTGTGACGCAAGAGAGGACGAGAGTGATTGTTTCGCAGAC
AAACGGTTCTACTGCACTGGGGGAGTCCCCTACTTTGTCACACGACTACATGTTCAGGAC
GGTGTTGGAGATTGCGTGGACTGGAGCGACGAATGTTCCAATTTTACGCCAAACGTCAAT
AGTTATCTGTCGTCCACCCAATATCTCATTAAGAATCAATTTCTAGGGGTCTTGGTTTTG
ACGATGGCGGCCTTGGCAGTATTAGGAAATGTGGTGGTCATTTATGGAGAAGCTTGTTTT
CTACGAAACCTGGTAACCAAGCGTGACGTCAGCGCTTCGCTACGCGCCAACCACATGCTG
GTGTTAAATCTAGCGGTTGCCGATTTTCTTATGGGCGTCTATTTGTCGGTTCTTGGAGTA
ACAAATCGTTTGTACAGCGGCAAGTTTTGTATCCTGAAGCGCTGGTGGCTGACAAGCGAC
CTGTGTGTTGCCTTGGGAGTTTTGGTCGTTCTTTCAAGTCAAACTTCAGTTTTTACTATG
CTTGCTCTTACAGCGACAAGAGTGCATTCCGTATTTAGGCCCATCGGTTCTTTAAACAAA
CCAAGCTTCCAAGTTGTAATGCAGACAATGCTCTGCACTTGGGGTATTTCCCTCACCTTG
GCTTTGATTCCTTTGTCTGGTATCAAACAAAGCAGTTTCTACTACTTAGCACAGATCGAA
CGAAACCCCGTTTTCAACGATGACGTCATCACATTCAAGGAAGCAAAGGAATACGTCATC
AATTTAGTGACGTACCTACGTGACCTTCAATCGCTGACCTTGGACGAGGCGCGATACTAC
AGTTGCAATACAGTATGTCTCCCCCAAGTGTTCGTTACAAAAGATTTTGACTCGTGGAAG
TTCTCGCTTACGATTTCTATTGTCAACTTCTTGAGTTTCGTGCTGGTTGCCGTCCTCCAT
ATTCTCATTGCTGCAAAGATTCGAAAATCGACCGTAAGGTCAAATAGGGGTCAAAGGCAC
AACAGAGGTAATCCGTGA
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[1-22] 6.1E-9 - T[56-77] 6.1E-9 - T[93-114] 6.1E-9 - T[130-151] 6.1E-9 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[25-82] 0.043 - T[116-154] 0.35 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[25-81] 8.675 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[59-80] 4.66516E-6 |
| PANTHER |
TSHR/LHCGR/FSHR (IPR034298) - T[64-440] 8.4E-55 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[196-445] 15.818 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[215-330] 3.3E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|