- Clone 'ma005k05' >
- Transcript 'KH2012:KH.C9.834.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S81.g02724.01.t
Possible name(s)
ZNF227; ZNF345; ZNF568
Gene model
Location
S81 [38,668 / 47,642]
Amino acid sequence
Length: 1,037
>Phmamm.CG.MTP2014.S81.g02724.01.p
MAEDDATVFNLFKDKLEEAMKLVPSLTTMHPSGMQLWLNAFQTEKDVQLKPLATDNGSFQ
ITLLQQDEIPTATSKLDVLTSESDLQDQTIELDTSNPEEWGLFQGDEGQIVAQPIKQSGV
NNTYKWSIDGDEINLTSDCDLKAQDVKVEDLSMNTVTDLYREEDSLTIDADDTSKFFNSN
AKCNATENVTDPTILVSITTETTDAVDVIGANGVDYIKSTPSKERKVVDPACYPCVREEW
YIKLPKQPHSNLVDDVCEVDTACVAFDMRNYLRNTSISLGNFSRNYLQRTQGTLSDLLNH
PKPWQDLSTRGRTMYTKMMQFLNAENIKEITEKLKEGYTSVRPGPTILTLPKELLKMLEE
EKKPPGELIDSLAADFQLEPEQLVDYCEQQIRKYGAVKEESPENKTASSPKGSGRQGNKL
ICPEPGCGIILGCKLALNTHQLIHTGSRPFKCSTCNKRFATVSNKRSHERRHEKRMHRKM
SKRALLVANLRHSKELQARKKLEVVEEEKAELSLCPKSKVNTDVSRFVCGVCSQRFTSRQ
HLHEHITLRHTSAKMRDQNKAYTCHVCLRSMKTVGALVDHLRTHTGDRPFRCPSCRKTFG
TKANLYRHLKTHTGEKRFECETCGARFTEASSVSTHMRTHTGEKPFECKICKKRFTQRGP
LDAHRLIHSDRRPYLCEICGVSFRQKTNLRAHELRHAGEKRFACEFCEQKFQYKNDLNRH
VLRHNGKRPYQCSICSRSFTRVQYMREHVHKIHDVTAFKCDKCGLGWASRSALERHRPVC
PVVVVTNDKAQKCENCGFVWSNPAALERHRVSCPAMDLTMSDDDSKIADDTKLTLPEAQE
RNMELDPSMLRVVSVDKLIGEGVLTDGKTYLLSTIPQESDESSLSNPIQCCISSFLPRSA
ASVTCSASSIASAMSTETDPSLSATSVTSSLSMSSRDRLPMHVAIMADGVVFANNIDASL
LDGGQVLVDQHDDARYSSIKKLALQSHVGEGESCSIDPNMQSVIVAQEEGEEVGTATRYV
VVSVSDDVQVYNSDPTQ
Nucleotide sequence
Length: 3,850
>Phmamm.CG.MTP2014.S81.g02724.01.t
GGCACCATAAACGCCTATGCTCCGTTGCGCCACCTATCGAACAAATTTCAACCAGGGGCC
AGCCAGATTGCAGTGTTAGTAGTTCTACCGAACCGTCTCTGGTCTCTTGTCAAAAATCGG
TGCTGCAGAGTTTTGAAATATGTTTCACTGTTAAAATCAACTTATTTGGATGTACTTTTG
GTTGTTTAAAGTAACGTATAGCCCCCAAATATGGCTGAGGACGATGCGACAGTGTTCAAT
CTTTTCAAAGACAAACTAGAAGAAGCAATGAAGCTTGTACCCAGCCTTACAACAATGCAC
CCAAGTGGAATGCAGTTGTGGTTAAATGCCTTCCAAACTGAAAAAGATGTACAGTTGAAA
CCGCTAGCAACAGACAATGGCTCATTTCAAATCACATTGCTGCAGCAAGATGAAATACCT
ACTGCAACATCCAAACTTGATGTTCTGACTTCTGAGTCCGATCTTCAGGATCAAACAATT
GAATTAGATACATCTAATCCAGAGGAATGGGGTTTGTTTCAGGGCGATGAAGGGCAAATT
GTTGCTCAGCCTATTAAGCAAAGTGGTGTCAACAACACATATAAGTGGAGTATTGATGGA
GATGAAATCAACTTAACATCAGATTGTGACTTAAAAGCTCAAGATGTAAAAGTTGAGGAC
TTGTCAATGAACACTGTCACAGATTTGTACAGGGAAGAAGACAGTCTCACAATTGATGCT
GATGATACAAGCAAGTTTTTTAATTCTAATGCTAAGTGTAATGCAACTGAAAATGTGACT
GATCCCACAATACTGGTATCTATTACAACTGAGACCACTGATGCTGTGGATGTTATTGGA
GCTAATGGAGTTGACTATATAAAATCAACTCCTTCCAAAGAGCGTAAAGTTGTTGATCCA
GCTTGCTACCCTTGTGTGCGTGAGGAGTGGTACATAAAATTACCAAAACAACCTCACAGT
AATTTGGTTGATGATGTGTGTGAAGTGGACACTGCTTGTGTTGCATTTGACATGCGGAAC
TATTTACGGAACACGTCAATATCACTTGGTAATTTCTCAAGAAACTACTTGCAGAGAACC
CAGGGAACACTTAGTGACCTTCTAAACCACCCCAAGCCATGGCAGGATCTTTCAACTCGT
GGTAGAACAATGTACACAAAAATGATGCAGTTCCTTAATGCAGAAAACATAAAGGAAATC
ACAGAAAAATTAAAGGAGGGATATACATCAGTTCGCCCTGGCCCAACAATTCTTACCCTG
CCTAAAGAACTATTGAAGATGTTGGAAGAAGAAAAAAAGCCTCCAGGTGAACTGATAGAT
TCATTGGCTGCTGATTTCCAACTTGAACCTGAACAACTAGTTGACTATTGTGAACAACAA
ATACGAAAATATGGTGCAGTAAAGGAAGAATCACCTGAAAACAAAACAGCTTCAAGTCCA
AAGGGTTCTGGTAGACAAGGCAATAAACTAATTTGTCCTGAGCCTGGCTGTGGAATAATA
CTTGGATGCAAACTGGCGCTAAACACTCACCAGCTTATCCACACGGGAAGTCGGCCTTTT
AAGTGTTCAACGTGCAATAAAAGATTTGCCACTGTGTCAAATAAACGCAGCCACGAGCGA
CGCCATGAAAAAAGAATGCATCGGAAAATGAGTAAAAGAGCGTTGCTGGTAGCCAATTTG
CGACATTCCAAAGAGCTGCAAGCTAGAAAAAAGTTAGAAGTTGTTGAAGAAGAAAAAGCA
GAATTATCTTTATGCCCAAAAAGTAAAGTCAACACAGACGTTTCAAGATTTGTGTGCGGC
GTATGTTCACAACGGTTCACCTCACGCCAACACCTTCACGAACACATCACATTACGTCAC
ACAAGTGCCAAAATGCGCGATCAAAATAAAGCGTACACCTGTCATGTGTGCTTGAGGTCC
ATGAAGACAGTGGGTGCTCTTGTCGACCATCTGCGCACTCACACTGGTGATCGACCGTTC
CGGTGTCCGTCCTGTCGCAAAACATTTGGCACCAAAGCGAACTTGTATCGGCACCTGAAG
ACTCACACAGGGGAGAAACGGTTCGAGTGTGAAACTTGCGGTGCGAGATTCACTGAAGCA
AGTTCGGTGTCCACACACATGCGAACTCACACTGGCGAAAAACCATTCGAGTGCAAAATA
TGCAAAAAGCGATTTACACAGCGTGGTCCGCTTGACGCTCATCGACTTATTCATTCTGAT
CGCCGCCCCTACCTTTGCGAGATTTGTGGGGTTTCATTTCGACAGAAAACCAACCTACGT
GCACATGAATTACGTCATGCAGGCGAAAAACGTTTCGCTTGTGAGTTTTGCGAGCAAAAG
TTCCAATATAAAAATGATCTCAACAGACACGTACTTCGACACAACGGCAAACGTCCCTAT
CAGTGCAGCATTTGCTCACGAAGTTTTACAAGAGTTCAATACATGCGAGAGCATGTCCAC
AAAATCCACGACGTTACTGCCTTCAAATGTGACAAATGCGGGTTAGGGTGGGCGAGTAGA
TCAGCTCTCGAGCGCCATCGTCCGGTTTGTCCGGTGGTTGTGGTTACCAATGATAAGGCT
CAAAAATGCGAAAACTGCGGATTTGTTTGGTCGAATCCTGCTGCCCTCGAGCGACACCGA
GTGTCATGTCCTGCCATGGACTTGACGATGTCAGACGATGACAGCAAAATTGCAGACGAC
ACGAAACTGACATTGCCAGAAGCGCAGGAAAGAAACATGGAATTGGATCCGTCCATGTTA
CGCGTGGTTTCTGTTGACAAATTAATAGGGGAAGGCGTTCTCACTGACGGAAAAACCTAT
CTGTTATCAACGATTCCTCAAGAGTCGGACGAAAGTTCGCTGTCGAATCCAATTCAATGT
TGCATCTCATCATTTTTGCCGAGGAGCGCCGCATCGGTGACTTGCAGCGCATCGTCCATC
GCAAGTGCAATGTCCACAGAAACTGACCCGTCCCTGTCTGCCACCAGCGTTACGTCATCC
CTGTCTATGTCGTCACGTGACAGACTTCCCATGCACGTTGCCATCATGGCTGACGGCGTG
GTTTTCGCCAACAATATTGATGCGTCGTTGTTGGACGGTGGGCAAGTTTTAGTCGACCAA
CATGATGACGCAAGATATTCGTCAATCAAAAAACTTGCCTTGCAAAGTCACGTGGGTGAG
GGGGAGTCATGCTCGATTGACCCCAACATGCAGTCGGTGATTGTTGCGCAGGAAGAAGGC
GAAGAGGTGGGAACAGCGACGCGTTATGTGGTGGTGAGTGTCTCAGATGACGTTCAGGTT
TATAACAGTGACCCAACGCAATAAAACCGAGTTAAGTGTGAATATAGTGCTGTTGCCAGT
TATATATTATTAACTTTCCTCGTTGTTCAACCGGTGATGCATATGTTAAACAAAAAGGAA
AGTTATGAGTAAAGCATGTTTTTGGTTGACATTGTGCAATTATTGTCCTGAAATAGGCTT
GGGATATTTGTAGGATGACTCGCGTTACTAAGTTTTAAACTTGTTATAAACCGTCTTTTT
CATACCTTTGGCGTAAATTATATCTCTAGCAACCGTGAAGGCGGCTGTTATAAATGTGTG
CTTGTGGTTAAAATTAAAATCACAAAAGTGGTGCTTACTAAATCTGTGTCCCCCAAAATG
TTTGTTGCGTTTTATCAAAATAGATATGTGTTGTTTTTGTGCCGTTGCAATTTGTTACGT
TACCTTTCTCTACATTTTATTTGTGTTTGTTGGCAAAAAAAGTGTTGCTGAAATTCGTTC
CGAGTGTAATGACATTCTTTTTACAATAGAAAAGATTTATTACAAATAACAGTAAAGAAA
CTGAAAGAGA
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[248-331] 1.29E-19 |
| ProSiteProfiles |
CUT_dom (IPR003350) - T[250-337] 22.128 |
| SMART |
CUT_dom (IPR003350) - T[251-337] 9.9E-22 |
| Pfam |
CUT_dom (IPR003350) - T[258-326] 8.3E-20 |
| SMART |
Znf_C2H2_type (IPR013087) - T[420-444] 0.84 - T[450-472] 0.011 - T[527-550] 0.046 - T[562-584] 0.014 - T[590-612] 6.5E-4 - T[618-640] 0.0063 - T[646-668] 0.019 - T[674-696] 0.0094 - T[702-724] 0.0098 - T[730-753] 0.0043 - T[791-811] 260.0 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[420-449] 9.993 - T[450-477] 10.658 - T[527-555] 11.094 - T[562-589] 13.069 - T[590-617] 15.022 - T[618-645] 16.352 - T[646-673] 13.339 - T[674-701] 13.568 - T[702-729] 13.069 - T[730-753] 10.408 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[422-444] . - T[452-472] . - T[529-550] . - T[564-584] . - T[592-612] . - T[620-640] . - T[648-668] . - T[676-696] . - T[704-724] . - T[732-753] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[424-472] 9.14E-11 - T[560-612] 5.15E-13 - T[598-655] 2.02E-19 - T[655-711] 1.8E-15 - T[711-764] 3.3E-11 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[618-640] 0.0047 - T[674-696] 0.0014 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN568_HUMAN | 33.505 % | 221 | 1.64E-61 |
| ZN227_HUMAN | 33.333 % | 222 | 1.19E-60 |
| ZN345_HUMAN | 33.756 % | 214 | 2.34E-60 |