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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Clone 'citb012j24' > 
  3. Transcript 'KH2012:KH.L106.19.v1...' > 
  4. Transcript 'KH2012:KH.C3.491.v3....' > 
  5. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S820.g12171.02.t

Possible name(s)

FAF1; FAF2; UBXN7

Gene model

Phmamm.CG.MTP2014.S820.g12171

Location

S820 [49,544 / 56,201]

Sequences

Amino acid sequence

Length: 546

>Phmamm.CG.MTP2014.S820.g12171.02.p
MQSLLPWPTIICKEILPNLGRVQTEGRTGKMLTFSCTLGGTTKDITLDDSNTVGDLKQIA
SIELGITPSETEFEKWPAVSHVLRPNNNTVLATMGLPHFNKLTVKMTPLPGVTIAEDTGN
SSVPLELPCSIFNENVTPSNDIVDLTRTYKLKISNVEDQQIHIIDCEGSKTLKEFKEDAA
AVTRIPLDQQEWRGFPKGDFVDNDATLSSLNLELPVHSLHINRKHSKTIPPHLNPFAVLA
GANNFPIHHNNGSSSTLPQPMVISSSDDEEPVETFGDDIFNDANVGVKRTISLMPERATD
EVIAQQQFKSEFLSRFLRSCQRYLGSGVADTVRRMKKDHFPMLVLAQGKGRSCDVTAIIQ
GNSELGELMARMIKAVEDAETQREQDIREEDARKAREHIKREQEEAYRQSLETDRAKMLV
EQEQMLKQEEDDRQKKIEEDKRLEEIKRLETLVPPEPSADSGEKVSRVRFRAPDGSTFQR
SFLASNTLNDLVNFVGSQGYHRDQYRILKSWPKVNILGLDLTSTLESNKIYPQDSLIIEE
VPDYDV

Nucleotide sequence

Length: 1,641

>Phmamm.CG.MTP2014.S820.g12171.02.t
ATGCAGTCACTGCTGCCTTGGCCGACAATCATTTGCAAGGAAATTCTTCCCAATCTGGGT
AGGGTTCAAACGGAGGGAAGGACAGGAAAAATGTTGACCTTTTCCTGTACTTTGGGTGGA
ACGACAAAAGATATTACCCTCGATGACTCCAATACTGTTGGTGATCTAAAGCAAATTGCC
TCAATTGAACTTGGTATAACCCCAAGTGAAACTGAATTTGAAAAATGGCCAGCTGTATCA
CATGTGTTACGACCAAATAATAACACAGTGCTTGCCACTATGGGTTTGCCCCACTTTAAT
AAATTGACTGTGAAAATGACTCCATTACCTGGTGTCACCATAGCAGAGGACACTGGAAAC
AGCAGTGTACCATTGGAACTTCCCTGCTCTATTTTTAATGAAAATGTAACACCTTCAAAT
GATATTGTTGACTTGACCCGAACATACAAATTGAAGATTTCAAATGTTGAAGACCAACAG
ATTCACATTATTGACTGTGAAGGTTCAAAAACTTTAAAAGAGTTCAAAGAAGATGCAGCT
GCTGTCACAAGAATCCCCTTAGATCAGCAAGAGTGGAGAGGCTTTCCAAAAGGAGACTTT
GTTGACAATGACGCTACCCTTTCTAGCCTAAATCTTGAGTTACCTGTTCATTCTCTGCAT
ATTAACCGAAAGCACAGTAAAACCATTCCCCCACACCTTAACCCCTTTGCGGTACTGGCC
GGAGCCAACAACTTTCCTATTCATCACAACAATGGCTCGAGTTCCACGTTGCCTCAACCT
ATGGTAATTTCGAGCAGTGATGATGAAGAACCTGTGGAGACATTTGGAGATGATATATTT
AATGATGCTAATGTAGGAGTAAAAAGAACAATTAGTTTAATGCCTGAAAGAGCAACAGAT
GAAGTAATTGCACAGCAACAGTTCAAATCAGAATTTTTATCGAGGTTTTTACGTTCGTGT
CAACGTTACCTGGGTTCGGGTGTTGCTGACACCGTGCGGCGGATGAAAAAAGATCATTTC
CCGATGTTGGTTCTCGCTCAAGGCAAGGGTCGTTCCTGCGATGTAACCGCTATCATTCAA
GGTAATTCTGAACTAGGCGAGTTGATGGCGAGGATGATAAAAGCTGTTGAAGATGCGGAG
ACACAACGAGAGCAGGACATACGTGAAGAGGACGCGCGAAAAGCAAGGGAGCACATCAAA
CGAGAACAGGAAGAGGCCTACAGACAATCACTGGAAACTGATAGAGCAAAAATGTTAGTG
GAGCAAGAGCAGATGCTGAAACAAGAGGAAGATGATAGGCAGAAGAAGATTGAGGAGGAT
AAACGGTTGGAAGAGATCAAACGACTGGAGACTCTTGTTCCTCCCGAGCCAAGCGCCGAT
TCTGGGGAAAAGGTTAGCCGAGTTAGGTTTCGTGCTCCCGACGGTTCCACGTTTCAAAGG
TCTTTCCTTGCAAGCAACACACTGAACGACCTGGTGAACTTCGTTGGTTCTCAGGGTTAC
CATAGAGATCAATACAGAATTCTTAAGTCTTGGCCGAAAGTCAACATCCTCGGTTTGGAC
CTCACTTCTACCCTTGAATCGAACAAGATTTATCCGCAGGACTCGCTAATTATCGAGGAA
GTACCAGACTACGATGTGTAA

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[28-109] 4.73E-5 - T[158-212] 1.63E-5 - T[428-541] 1.81E-20
SMART
UBX_dom (IPR001012) - T[457-540] 9.6E-14
ProSiteProfiles
UBX_dom (IPR001012) - T[461-538] 17.468
Pfam
UBX_dom (IPR001012) - T[462-539] 1.2E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FAF1_HUMAN 42.291 % 189 9.07E-53