- Transcript 'KH2012:KH.C4.633.v1....' >
- Transcript 'Mooccu.CG.ELv1_2.S24...' >
- Clone 'AHC0AAA201YA09' >
- Clone 'cilv042a05' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S821.g12178.01.t
Possible name(s)
DDX6; EIF4A1; EIF4A3
Gene model
Location
S821 [60,673 / 64,562]
Amino acid sequence
Length: 312
>Phmamm.CG.MTP2014.S821.g12178.01.p
MIGRCDLNKDHVQALVLVPTRELALQTSQIAIELSRHMGALNVMVTTGGTNLRDDIMRLE
QSVHVIVATPGRILDLINKGIAKVDHCNMIVLDEADKLLSQDFKQMMDSLVQSLPVSRQI
LLFSATFPVTVKDFMARHMKKPYEINLMDELTLKGVTQYYAYVEEKKKVHCLNTLFSKLQ
INQSIIFCNSTHRVELLAKKITELGYSCFYIHAKMKQEYRNRVFHDFRQGMCRNLVCSDL
FTRGIDIQAVNVVINFDFPKMPETYLHRIGRSDRFSLAQIEEELKTEIKPIPPVIDKSLY
VAEHSQEEEKRE
Nucleotide sequence
Length: 939
>Phmamm.CG.MTP2014.S821.g12178.01.t
ATGATTGGAAGATGTGATCTAAACAAGGACCATGTACAAGCCCTGGTACTGGTTCCAACT
CGTGAATTAGCATTGCAAACATCACAAATTGCAATTGAATTGAGTCGACATATGGGAGCA
CTTAATGTGATGGTCACCACTGGTGGAACAAACCTTCGAGATGACATAATGCGACTTGAG
CAAAGTGTACATGTTATTGTTGCTACCCCTGGAAGAATTTTGGATCTAATCAACAAAGGA
ATTGCTAAAGTTGATCATTGCAATATGATTGTACTTGATGAGGCAGACAAGCTTCTTTCC
CAGGACTTCAAACAGATGATGGACAGTCTTGTTCAGTCTTTGCCTGTTAGCAGACAAATT
CTTCTTTTCTCTGCCACCTTTCCAGTAACAGTGAAGGATTTCATGGCCAGACACATGAAA
AAGCCATATGAAATCAATCTGATGGATGAACTAACTCTGAAAGGCGTAACTCAGTATTAT
GCCTATGTTGAGGAAAAAAAGAAAGTTCATTGCCTCAACACATTGTTTTCCAAGTTGCAA
ATCAACCAATCAATCATCTTCTGTAACTCAACTCACAGAGTTGAACTGCTTGCAAAGAAA
ATTACAGAGCTTGGATATTCCTGTTTTTACATCCACGCTAAAATGAAGCAGGAATATCGC
AACAGAGTGTTCCATGATTTTCGACAAGGTATGTGCCGCAACCTTGTATGCAGTGACCTG
TTTACTCGAGGAATTGACATTCAAGCTGTAAATGTTGTCATTAATTTTGACTTCCCTAAG
ATGCCCGAAACATACCTCCATCGCATTGGACGATCAGATCGTTTCAGTCTGGCTCAAATT
GAAGAAGAGTTGAAGACTGAAATCAAACCTATTCCTCCAGTAATTGATAAATCTCTGTAT
GTTGCTGAACACTCGCAAGAAGAAGAGAAACGAGAATGA
| SMART |
Helicase_ATP-bd (IPR014001) - T[1-159] 9.6E-18 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[1-145] 24.027 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[8-133] 6.4E-28 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[11-275] 5.28E-63 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[91-99] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[155-312] 19.771 |
| CDD |
Helicase_C (IPR001650) - T[156-275] 5.01591E-34 |
| Pfam |
Helicase_C (IPR001650) - T[168-275] 5.8E-26 |
| SMART |
Helicase_C (IPR001650) - T[195-276] 1.9E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 36.996 % | 203 | 1.42E-62 |
| IF4A1_HUMAN | 36.013 % | 192 | 3.24E-58 |
| DDX6_HUMAN | 72.755 % | 500 | 6.91E-178 |