Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S822.g12179.01.t

Possible name(s)

ARPP21; R3HDM1; R3HDM2

Gene model

Phmamm.CG.MTP2014.S822.g12179

Location

S822 [539 / 3,126]

Sequences

Amino acid sequence

Length: 288

>Phmamm.CG.MTP2014.S822.g12179.01.p
MLVHRVAAYFGMDHNIDAKGTSVIINKTKSTRLPDTKFSEHILSASELNAAQEDMRRRSI
LKRMQNCQSLDHTNVLENNKVHIIYLVALSHEDWKNYKQRSFEERENNYEKIRARIFKNQ
GADNGRFHKEVRSKDKERVLAQWKKRPWSSTDLGSLPGRNQPTPTGMNESGLTAKSSSFS
GITVLSRHTNNDGGSLSSSTSSVFVDQSQPYNGSATEEWSDNHHSASNNAKPFYQNVELL
PKCDLLNGFSSCHVVNLCEKQMVIAVPEGFTVKPGTLLTHPVTGRTSQ

Nucleotide sequence

Length: 867

>Phmamm.CG.MTP2014.S822.g12179.01.t
ATGTTAGTACATCGGGTGGCAGCATACTTCGGTATGGATCATAATATTGATGCCAAAGGG
ACATCTGTTATCATAAATAAAACCAAAAGCACAAGACTGCCTGATACAAAGTTTAGTGAA
CACATTTTGAGTGCAAGTGAGCTTAATGCAGCTCAGGAAGATATGAGAAGACGTTCCATC
CTGAAAAGAATGCAAAACTGCCAAAGTCTTGATCATACCAATGTGTTGGAAAACAACAAG
GTTCACATTATTTATCTTGTGGCATTATCCCATGAGGATTGGAAAAATTACAAGCAGCGT
TCGTTTGAAGAGAGAGAAAACAACTACGAGAAAATTCGAGCTAGGATATTTAAAAACCAA
GGAGCTGATAATGGTCGGTTTCACAAAGAAGTTCGAAGTAAGGACAAGGAACGTGTTCTG
GCTCAATGGAAAAAAAGACCCTGGAGTAGCACTGATCTTGGAAGTTTGCCAGGAAGAAAC
CAACCAACTCCAACTGGAATGAATGAAAGTGGACTTACTGCAAAATCGAGTAGTTTTTCG
GGTATAACCGTCTTATCGCGTCACACCAATAATGATGGTGGAAGTTTATCTAGCAGTACT
TCATCGGTGTTTGTCGACCAATCACAGCCATACAATGGATCTGCAACTGAAGAATGGTCG
GACAACCATCATTCTGCCAGTAATAATGCAAAACCTTTCTATCAAAACGTTGAACTTCTT
CCCAAATGTGATCTTCTCAATGGTTTTAGTTCATGTCATGTGGTAAATTTATGTGAGAAA
CAGATGGTCATTGCAGTACCAGAGGGTTTCACTGTAAAACCTGGTACACTCTTGACACAT
CCTGTAACAGGTAGAACTTCACAATAA

InterProScan

Gene3D	R3H_dom_sf (IPR036867) - T[1-67] 3.3E-16
SUPERFAMILY	R3H_dom_sf (IPR036867) - T[1-46] 2.31E-11
ProSiteProfiles	SUZ (IPR024771) - T[32-121] 9.397
Pfam	SUZ (IPR024771) - T[56-119] 6.0E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ARP21_HUMAN	32.911 %	95.9	4.16E-22
R3HD1_HUMAN	34.404 %	101	4.63E-24
R3HD2_HUMAN	35.5 %	89.4	6.67E-20