Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S82.g02757.02.t

Possible name(s)

TBC1D15; TBC1D17; TBC1D25

Gene model

Phmamm.CG.MTP2014.S82.g02757

Location

S82 [125,358 / 130,687]

Sequences

Amino acid sequence

Length: 420

>Phmamm.CG.MTP2014.S82.g02757.02.p
MEASVYLWDRQLVENAQGNQEDRIVAFKKDGVFVHFYNPGNDDDKIIGGTLSIVEEGHKR
LLEWKPNEANLPADEIDNEHDTQVLSGSSSAVVGTEVQDCSTGQEISSEMRCPPSNEGKE
SSDPEWTVVNDSGHSKSNSVDHESFELAMDAVPSLQSSPETTVPNYAFSVQLQEIRYIKR
SNKGVGWPYIVLEMRDGGTLPTLHFHHKGCKKFLKIVETYIPTAPSTKYPRTIEILQDNP
NALAQSFDELNLFGADTSGQPHHPGAFAKKLIQDPVTTAFSGFSKVTNFLQDMLNPAETM
PQSRPMHERASVMNEDATEAVGAGRIQIKQDDSSGGFELITCAQLGPRCDPLRGQPLDVE
TWNNHKDEEGRIIDPDGIKEIIFRGGIEPVLRKEVWKYLLGYFEWNMTQAEIKSYKKDKE

Nucleotide sequence

Length: 1,263

>Phmamm.CG.MTP2014.S82.g02757.02.t
ATGGAGGCATCAGTGTATTTATGGGATAGGCAGCTTGTAGAAAATGCCCAGGGAAATCAA
GAAGATCGAATTGTTGCCTTCAAGAAGGACGGAGTGTTTGTTCATTTTTACAATCCTGGA
AATGATGATGACAAAATAATAGGTGGCACTTTAAGCATTGTGGAGGAGGGCCACAAGCGC
TTATTAGAGTGGAAACCAAACGAAGCAAACTTACCTGCAGATGAAATTGATAATGAGCAT
GACACTCAAGTTTTAAGTGGATCCTCGAGTGCTGTTGTAGGAACAGAAGTCCAAGATTGC
TCAACTGGGCAGGAAATTTCATCAGAAATGAGATGTCCACCATCCAATGAGGGCAAGGAA
TCATCAGATCCTGAGTGGACAGTTGTTAACGACAGCGGTCATTCAAAATCCAATTCAGTG
GACCACGAATCATTTGAACTTGCGATGGACGCTGTTCCCTCCTTGCAGTCGTCCCCTGAA
ACCACTGTCCCTAACTATGCTTTTTCAGTCCAACTGCAAGAAATACGCTACATTAAAAGA
TCCAACAAAGGTGTAGGTTGGCCTTACATCGTGCTAGAGATGCGGGATGGAGGAACTTTG
CCTACTCTTCACTTCCATCATAAAGGATGCAAGAAATTTCTGAAAATAGTCGAGACATAC
ATTCCAACTGCCCCGTCGACCAAATACCCACGAACTATTGAAATCTTACAAGACAACCCT
AATGCACTTGCTCAATCTTTCGATGAACTGAATCTGTTTGGAGCGGACACATCAGGGCAA
CCTCACCACCCCGGGGCCTTTGCTAAGAAGCTTATTCAGGATCCAGTGACAACAGCGTTC
AGTGGCTTCTCGAAGGTCACAAACTTTCTGCAAGATATGCTGAACCCGGCGGAAACAATG
CCACAATCTCGGCCAATGCATGAACGAGCAAGTGTGATGAACGAAGACGCAACCGAAGCT
GTCGGTGCCGGTCGGATCCAAATAAAACAAGATGACTCATCAGGCGGTTTTGAACTCATC
ACATGTGCTCAACTTGGTCCCCGATGTGATCCATTGCGAGGTCAACCTCTCGATGTTGAG
ACGTGGAACAATCACAAAGATGAGGAGGGGAGGATCATAGATCCGGATGGGATAAAAGAG
ATTATATTCAGAGGGGGCATTGAACCAGTGCTTCGGAAAGAAGTTTGGAAATACTTGCTT
GGTTATTTTGAGTGGAACATGACGCAAGCTGAAATCAAGAGCTATAAGAAAGATAAAGAG
TAA

InterProScan

Pfam	DUF3548 (IPR021935) - T[25-253] 3.5E-24
SUPERFAMILY	Rab-GTPase_TBC_sf (IPR035969) - T[360-419] 1.36E-8
ProSiteProfiles	Rab-GTPase-TBC_dom (IPR000195) - T[386-420] 8.671

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TBC15_HUMAN	29.167 %	170	8.61E-47
TBC17_HUMAN	31.061 %	186	6.0E-53