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- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S835.g12260.01.t
Possible name(s)
GATA3; GATA4; GATA6
Gene model
Location
S835 [9,248 / 13,743]
Amino acid sequence
Length: 737
>Phmamm.CG.MTP2014.S835.g12260.01.p
MYADDLAAYCSPAASEQQTFTDSTAKHSTRKVTGNLEKTSTLDRNTPYSSNEDVGQYYYQ
YPQEKEINNGENVKTYQTREEIDSSRVQSATPPSAFSPMSEDIVAAGGSEGRLLFPQQKK
NPNGTAQKVMKPRSSLPMCDSTTAQGNSDASPLPCDPQRTCSYESSEDDHKDLQNSQGLF
SLDPYTGKQTDAYTPINFAQSSCTKHISNFPVLTSTATNFGLRSNYSSRPNLYNASNDSS
PFHTNSLQSQHFGALKSGSYATQSAGSSLYPTNQQHSYHQFVPTSSYNGQSYPCDYSIPT
SSGSSNSSYGYLGSSEMWNPSASSIAYDPSSVAAVAAAMNYGVPINHSTTPYMGGISNYQ
YETRECTNCGTFTATTWGRDSSGQYLCNACGLWRTNGHIRGNAKPKGKLAACRRQVCSNC
STTVTTLWRRSPEGNPVCNACGLYQKLHGVARPRTMKKDSIQTRKRKPKGQSKGKSQKKG
TSSSNNTEAISVPSLSPSRLYNSVNGGNSSLNLVTRESSSSVADGSVTNSLLSSTSLLDT
SHMTSGIGNVSSVSTRDRSSISPVARSDNCMQSVCLGSSPDSGIGNTHGNAASTSQVQRT
VGDIRSSPDSTGYSPSASYTLPASESYDLKQKIAGSNNEFSAMYADSSASEVPTFSSHPN
VLQLPDGGINNLPIVSTHLSDAMASQTPFPYNSLSALYAAGSTGGPSRDSRRHFHQYHPY
VRPPPHQPFVKAEPAVM
Nucleotide sequence
Length: 2,214
>Phmamm.CG.MTP2014.S835.g12260.01.t
ATGTACGCGGATGATTTGGCAGCTTATTGCTCTCCTGCTGCAAGTGAACAACAGACTTTT
ACTGATTCCACTGCCAAACATTCTACACGAAAAGTTACTGGAAATCTCGAGAAAACATCA
ACGTTGGATAGAAATACGCCGTATTCATCCAATGAAGATGTGGGCCAGTACTACTATCAA
TATCCCCAAGAAAAGGAAATAAATAACGGCGAGAACGTGAAAACTTACCAAACACGCGAG
GAGATTGACAGTTCACGAGTGCAATCAGCGACACCACCATCAGCGTTTTCACCCATGTCC
GAAGATATTGTTGCTGCTGGAGGAAGTGAAGGCAGACTGCTTTTCCCACAGCAGAAAAAA
AATCCAAATGGAACAGCGCAGAAGGTCATGAAACCGCGATCGAGTTTACCTATGTGTGAT
TCAACTACAGCCCAAGGAAATTCTGATGCAAGTCCTTTGCCGTGCGACCCCCAACGGACT
TGCTCATACGAATCTTCTGAAGATGATCACAAAGATTTACAAAATAGCCAAGGATTGTTT
AGTTTGGATCCATACACAGGAAAACAGACCGATGCTTATACGCCCATCAACTTTGCTCAG
TCCTCATGCACAAAGCACATTTCAAACTTTCCTGTATTAACATCCACTGCCACTAATTTT
GGCCTCAGGTCAAATTACTCAAGCAGACCGAATTTATACAACGCGTCCAACGACAGTTCC
CCGTTTCACACCAACAGTTTGCAAAGTCAACACTTCGGTGCATTAAAGTCAGGAAGTTAT
GCAACGCAGTCTGCTGGATCGTCGTTATATCCCACCAACCAACAACATTCTTACCATCAG
TTTGTCCCAACATCATCATACAACGGGCAGTCTTACCCGTGTGACTATTCAATTCCGACT
TCTTCCGGATCGAGCAATTCATCTTACGGATACTTGGGCTCTTCTGAAATGTGGAACCCA
TCCGCATCCAGTATTGCGTATGATCCATCCAGTGTTGCAGCTGTAGCTGCGGCAATGAAC
TATGGAGTGCCCATCAATCATTCGACAACTCCTTATATGGGCGGGATATCGAATTATCAA
TACGAAACACGAGAATGTACGAATTGTGGAACATTTACCGCAACAACTTGGGGAAGAGAC
TCTAGTGGTCAATATTTGTGCAATGCTTGCGGTTTGTGGCGCACCAATGGACATATTCGC
GGAAATGCAAAACCAAAGGGAAAATTGGCCGCATGTCGTCGACAGGTGTGCTCAAACTGC
AGTACAACAGTTACGACCCTTTGGCGCAGAAGTCCAGAAGGAAACCCAGTGTGCAATGCC
TGTGGACTCTACCAGAAGTTACATGGGGTGGCACGTCCACGAACCATGAAAAAAGACAGT
ATTCAAACACGGAAAAGAAAACCGAAAGGACAATCAAAAGGAAAGTCCCAGAAGAAAGGT
ACCAGCTCCTCGAATAACACCGAAGCAATTTCTGTCCCATCGCTTTCACCCTCGAGACTT
TACAACTCGGTGAACGGCGGGAACTCGTCATTGAACCTCGTTACCCGAGAAAGCAGTTCG
TCGGTCGCTGATGGTTCCGTGACAAACTCGCTACTTTCATCTACCTCGCTGCTAGACACC
AGTCACATGACATCGGGTATAGGAAACGTAAGCTCCGTTAGCACTCGTGACAGAAGCAGC
ATTTCGCCAGTTGCTAGGTCGGACAATTGCATGCAATCGGTGTGTCTAGGTTCCTCGCCC
GACTCGGGCATCGGCAACACCCACGGTAATGCTGCCTCCACAAGTCAGGTGCAACGGACT
GTTGGTGACATCCGTTCATCCCCTGATTCGACCGGCTATAGTCCTTCTGCCTCGTACACC
CTTCCTGCAAGTGAATCTTACGATCTGAAACAAAAGATTGCTGGAAGTAATAACGAGTTT
TCGGCCATGTATGCAGACTCCTCTGCAAGCGAAGTACCAACTTTTTCAAGTCACCCCAAT
GTGTTACAGTTACCCGATGGTGGTATCAACAATTTGCCGATTGTGTCTACTCACCTGTCG
GATGCAATGGCTTCACAAACCCCCTTTCCATACAACAGCCTCAGTGCATTGTATGCTGCG
GGCTCGACTGGTGGTCCGTCGCGTGATTCCCGTCGCCATTTTCATCAGTATCACCCTTAC
GTACGACCTCCTCCCCACCAACCCTTCGTAAAAGCCGAACCTGCAGTGATGTAG
| SMART |
Znf_GATA (IPR000679) - T[360-409] 7.1E-6 - T[411-461] 2.8E-23 |
| ProSiteProfiles |
Znf_GATA (IPR000679) - T[360-413] 16.382 - T[417-464] 26.139 |
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[360-409] 8.7E-11 - T[411-478] 2.6E-26 |
| PRINTS |
Znf_GATA (IPR000679) - T[413-430] 2.5E-8 - T[431-448] 2.5E-8 |
| CDD |
Znf_GATA (IPR000679) - T[416-467] 6.8568E-22 |
| Pfam |
Znf_GATA (IPR000679) - T[417-450] 6.3E-15 |
| ProSitePatterns |
Znf_GATA (IPR000679) - T[417-441] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GATA6_HUMAN | 58.475 % | 149 | 1.03E-37 |
| GATA4_HUMAN | 59.322 % | 151 | 1.38E-39 |
| GATA2_HUMAN | 60.185 % | 139 | 5.32E-35 |