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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R5.2...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S844.g12326.01.t

Possible name(s)

NLRC5; NLRP12; NOD2

Gene model

Phmamm.CG.MTP2014.S844.g12326

Location

S844 [20,303 / 26,165]

Sequences

Amino acid sequence

Length: 707

>Phmamm.CG.MTP2014.S844.g12326.01.p
MATLVNVGCDVNIYLPDGDTISDQGDYECFKKVYESQTQQTFPDVTFVVDLPNDEVPIVH
PSLLNVKFFEGGIDHKFRDYRPSNANDADCFYYHQTMPFEDLLGAAKRDRFCALIGPPGC
GKTTCSKRLAKQEGLWCLHYSFMEMGYGEQKLSLQQLLIDYVYRDLDAEVRKKAFRWLSS
HAKECALIFDGYDQATWSLDGVAPVNASYDTPLLVQQLIANLCGGVFLREATVIFTSRPH
AMISVPGPLRPKLTILVHDLTDYGMNLLFRAMAGDHANKLWLDFATTAPLLLNLCRTPAL
LQFIICAALSRRTQDREQLHTLTGTYSILLEHIGHSSLSRGQDVENMRGQIGKVAFGATQ
RATVMMNVQDLTSEGLDEQSVQDYIIALPGYKGRNQRLLPGDKRYFFVHQTWQEYFTAYY
ICYFLSDDDFEAILQKVATDKAWSMVRRFVCGLLLNKSFPKPGEFLELLIDLLEVEDEFL
QPYVEKFPVVVVFSYITFGSSNAFALTRFLRKTKKAVEKLEFVECVLNNGLMEICKAVGS
MTNKMTHLNLRGSTLGGDAMSALAHCVHNVEEMDLRICDIRTITPLTAAVATLETPMRQL
NFSGNEIGNVGADLLADCVQNIKELEIREGEITSIEKLAGSVLRHNHQLKLLDLSFNPLG
DEGLPALISCLGNIEKVRMYRCPISENGKVQIREKLMELNLPVSQTY

Nucleotide sequence

Length: 2,124

>Phmamm.CG.MTP2014.S844.g12326.01.t
ATGGCAACCTTGGTCAACGTGGGATGTGATGTCAATATATATCTACCTGATGGTGATACA
ATCTCAGACCAAGGTGACTACGAATGTTTTAAGAAGGTCTATGAATCCCAAACCCAGCAA
ACTTTTCCTGATGTCACTTTTGTTGTCGATTTGCCGAATGACGAGGTGCCAATCGTCCAC
CCGAGTTTATTGAATGTGAAATTTTTCGAGGGTGGTATTGATCACAAGTTTCGAGATTAT
CGCCCTTCCAATGCCAATGATGCCGACTGTTTTTATTACCATCAGACAATGCCTTTTGAG
GATCTGCTGGGCGCTGCCAAACGGGACCGATTCTGTGCTCTGATTGGTCCACCGGGCTGC
GGTAAAACCACGTGCTCCAAACGTCTAGCGAAGCAGGAAGGCCTTTGGTGTCTTCATTAC
AGCTTCATGGAGATGGGTTATGGTGAACAAAAGTTGAGTTTGCAGCAGCTGCTAATTGAC
TACGTTTACCGAGATCTAGATGCAGAGGTCCGTAAAAAGGCGTTTAGATGGCTTTCTTCG
CACGCTAAAGAATGTGCTCTAATCTTTGATGGGTATGATCAAGCAACCTGGTCTTTAGAT
GGTGTAGCCCCTGTAAATGCTTCGTACGATACACCGTTACTGGTACAACAGCTTATAGCT
AACCTCTGTGGAGGCGTTTTTCTTCGCGAGGCTACTGTGATTTTTACCTCACGCCCTCAT
GCGATGATATCAGTTCCAGGGCCACTGCGACCAAAGCTTACAATTCTCGTGCACGACTTA
ACAGATTACGGCATGAACCTGTTATTTCGTGCAATGGCCGGAGATCATGCAAACAAGCTT
TGGCTTGACTTTGCCACTACTGCACCGCTTCTTTTAAATCTTTGTCGCACTCCAGCACTT
CTTCAGTTTATTATCTGCGCCGCTTTAAGTCGCAGAACACAAGACAGGGAACAACTACAT
ACACTTACCGGGACATATTCGATTCTTCTAGAGCACATCGGTCATTCATCACTTAGTCGA
GGTCAAGATGTTGAAAATATGCGAGGGCAAATTGGAAAGGTAGCATTTGGCGCCACACAA
AGAGCGACCGTTATGATGAATGTCCAGGACTTGACGAGCGAAGGACTGGACGAACAAAGT
GTTCAAGATTACATTATTGCTTTACCTGGCTACAAAGGCCGAAATCAAAGACTCCTGCCC
GGCGACAAACGATATTTCTTTGTTCATCAAACATGGCAGGAATACTTCACTGCTTATTAC
ATCTGTTACTTCCTTAGTGACGACGATTTCGAAGCTATTCTGCAAAAGGTTGCTACTGAT
AAAGCTTGGTCCATGGTGAGAAGGTTCGTCTGCGGACTTCTTTTGAACAAATCGTTTCCC
AAACCAGGGGAGTTCTTGGAACTTTTGATTGATCTTCTGGAAGTAGAAGACGAATTTCTA
CAACCTTATGTTGAAAAGTTTCCAGTGGTGGTTGTATTCAGTTACATTACCTTCGGATCA
AGTAACGCATTTGCGCTGACTCGTTTTCTACGGAAGACGAAAAAGGCCGTGGAAAAGCTG
GAGTTTGTTGAGTGTGTGCTCAACAACGGACTAATGGAAATCTGCAAAGCTGTAGGCTCG
ATGACAAACAAAATGACCCACCTGAATCTTAGAGGCAGCACACTAGGTGGCGATGCCATG
TCAGCGCTTGCTCACTGCGTGCACAATGTGGAAGAAATGGACCTTCGCATTTGTGACATT
CGAACTATAACACCACTTACTGCAGCTGTGGCAACACTGGAAACCCCGATGAGACAACTG
AACTTTAGTGGCAACGAGATCGGAAACGTTGGAGCAGACTTACTGGCGGACTGCGTTCAG
AATATCAAAGAGCTTGAGATCCGAGAAGGGGAAATCACCAGCATCGAGAAACTGGCTGGC
AGCGTACTACGTCACAACCATCAGTTGAAACTACTTGACTTGTCTTTCAACCCACTTGGT
GACGAAGGTCTTCCTGCGCTTATCAGTTGTCTTGGTAACATTGAAAAAGTTCGAATGTAC
CGATGTCCAATTTCAGAAAACGGAAAAGTCCAAATCCGAGAAAAGCTTATGGAACTCAAT
CTTCCAGTTAGTCAAACATATTAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[107-297] 4.47E-9
Pfam
NACHT_NTPase (IPR007111) - T[111-272] 1.0E-9
Gene3D
LRR_dom_sf (IPR032675) - T[489-702] 2.7E-26
Pfam
Leu-rich_rpt (IPR001611) - T[543-564] 1.5 - T[597-616] 0.065 - T[645-664] 0.0011

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value