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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C4.795.v1....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S84.g02807.01.t

Possible name(s)

RDH13

Gene model

Phmamm.CG.MTP2014.S84.g02807

Location

S84 [209,122 / 212,331]

Sequences

Amino acid sequence

Length: 314

>Phmamm.CG.MTP2014.S84.g02807.01.p
MSFINSPVFNRVIVPISFTASLFGGVFLLREYTGGRKCPSNDRMDGKVVLITGANTGIGK
ETAKEIAKREQQHIDVLVNNAGVMKPRSPKTTPNTDDGFERQFGVNHLGHFLLTNLLLDQ
LTNGESPGRVINVTSDAYQKGKVDIDDIEKNELKGDNHLTELYYQSKLANVMFTKVLSDR
SRENLEKRFTCNCVNPGVAHTGIGRHANVPFYSVGVHMFKPLTWMAMRTPRQAAQTSIYL
ACDSALANVTGAYFDDCKKVEDTKDMCDGVVAEKLWKASEEWTNLNQRMSQLRETAKSGA
PQNIGPACNNSTTS

Nucleotide sequence

Length: 945

>Phmamm.CG.MTP2014.S84.g02807.01.t
ATGAGTTTTATTAACAGTCCGGTGTTTAATCGGGTGATTGTTCCAATATCATTCACTGCA
TCTTTATTTGGTGGAGTCTTTCTTTTGAGAGAATACACTGGAGGAAGAAAATGCCCAAGC
AATGATCGAATGGATGGAAAAGTGGTTCTTATCACTGGAGCTAATACAGGAATTGGGAAG
GAAACTGCAAAGGAAATTGCAAAAAGGGAACAGCAACATATTGATGTGCTAGTTAACAAT
GCTGGAGTTATGAAACCAAGATCTCCAAAAACAACACCAAACACTGATGATGGTTTCGAA
AGGCAATTTGGTGTTAACCACTTAGGGCATTTTCTTCTTACCAATCTTTTGTTGGATCAG
TTAACAAATGGCGAATCTCCAGGAAGAGTAATCAATGTTACCTCTGATGCCTATCAAAAG
GGAAAGGTGGACATTGATGACATAGAAAAGAATGAACTGAAAGGAGATAATCATCTGACT
GAACTTTATTACCAAAGCAAATTGGCCAATGTCATGTTCACAAAAGTCCTCAGTGACAGG
AGCAGAGAAAACCTGGAGAAACGATTTACATGCAACTGTGTGAATCCTGGGGTCGCCCAC
ACTGGTATTGGTCGACATGCAAATGTTCCTTTCTATTCTGTTGGAGTCCACATGTTCAAA
CCACTGACGTGGATGGCGATGCGAACACCACGACAAGCAGCACAAACCTCCATTTACCTT
GCGTGCGATTCGGCTTTAGCCAACGTTACCGGGGCATATTTCGACGACTGTAAGAAAGTG
GAGGACACAAAAGACATGTGCGACGGCGTTGTCGCGGAAAAGTTGTGGAAAGCCAGTGAG
GAGTGGACGAATTTGAACCAGAGGATGTCGCAACTTCGAGAAACTGCCAAATCCGGGGCA
CCACAGAACATTGGACCCGCTTGTAATAACTCAACAACCAGTTGA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[45-256] 2.23E-36
PRINTS
SDR_fam (IPR002347) - T[48-65] 1.6E-11 - T[72-83] 1.5E-6 - T[122-138] 1.6E-11 - T[128-136] 1.5E-6 - T[163-182] 1.5E-6 - T[163-182] 1.6E-11 - T[187-204] 1.6E-11 - T[223-243] 1.6E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 36.97 % 183 7.74E-56
RDH14_HUMAN 40.826 % 142 7.65E-40
RDH12_HUMAN 32.012 % 140 1.92E-39