- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S855.g12391.01.t
Possible name(s)
ATG5; BMS1; TSR1
Gene model
Location
S855 [15,532 / 23,665]
Amino acid sequence
Length: 892
>Phmamm.CG.MTP2014.S855.g12391.01.p
MSAISKKLWEGKLPVCFELASHEVDCPTEPGMLYLMVARTSYLTMFSQQIEEFFNNYINL
KQKDEVWFEYNGSPLRWHYPCGVLFDLLCNPATDLPWSITVHFQNFPSDVLLRCPGDNAI
ESNYMMTLKEADQIKHKGQVISNMSRNQHMQLWHGIRKRLIGTGQSPPHLVTLIPLHESV
DVKELSAAIQCCDEESSPSFAPLSTGGFTINLPRLKHRYQIILPTSSTISDVLNCVRVTD
SVVFLIGCNDNCMDKVGVQLLECLIAQGLPASVFYVQGIDKMPIKQRSSTKKEITKQIEQ
YMSAPKLLTVDTPQETLNLLRCVGEMKHRGIGMRSGRSYMLVEKSEFVCEDNESTGTLKI
SGHVRGSRLDVNKLVHLVGWGDFQIQQIEKIAEHCPWKMSKNRNQNNEMSTDEKMVSIRG
EMYQPFQSFDEFLLPDPAQQQDLTREAEVDPLDGEQTWPTEEELREAEDTSSLQSNKKKL
QKRVPKGTSDYQASWILDENEDWEEASGSEIDEDAFEDREEFQPCDEELSQADEDEAETA
SVMMSEMEDTASQYDDKMEDDQDQLARFREQRTNEMFPDEIDTPATVNARTRFQRYRGLK
SFRTSPWDPKENLPSEYARIFQFQSFENMKKRIKKMETEENSSVEAGTYVTVYLKDVPKS
FVNQASMLSTITMFSLFPHEQKMSVLHFALKSCTERSIKSKDELIFHVGFRQFKARPLFS
QHTVGSKHKLERFLPTSGVVVASVYAPITFPPANVVAFVKDPNGDLEQVANGTLFKVDPD
RVVVKRIVLSGHPFRINKRAATIRYMFFNPDDVLWFKPVELRTKWGRRGHIKEPLGTHGH
MKCIFDSQLTSQDTVMMMLYKRVFPKWSYCPITPNTESDVAMEESFDEELFT
Nucleotide sequence
Length: 2,679
>Phmamm.CG.MTP2014.S855.g12391.01.t
ATGTCTGCAATATCAAAAAAGCTTTGGGAGGGCAAACTTCCAGTTTGCTTTGAGTTGGCA
AGTCATGAAGTGGACTGCCCTACAGAACCAGGAATGCTGTATCTCATGGTTGCAAGAACA
TCTTATCTGACAATGTTTTCACAGCAAATTGAGGAGTTTTTTAACAATTACATTAATCTA
AAACAGAAAGATGAAGTGTGGTTCGAGTACAATGGTTCTCCTCTGCGATGGCATTACCCA
TGTGGTGTGTTGTTTGATTTGCTGTGCAACCCTGCCACAGACTTGCCATGGAGTATCACT
GTGCATTTTCAAAACTTTCCTTCGGATGTACTTTTGCGCTGCCCAGGTGATAATGCTATC
GAGTCAAACTACATGATGACCTTAAAAGAAGCAGACCAAATCAAGCACAAAGGTCAAGTT
ATCAGCAACATGAGCCGTAACCAGCATATGCAACTGTGGCATGGCATTAGAAAGAGGTTA
ATTGGAACAGGTCAAAGCCCCCCACATTTGGTCACCCTAATTCCTTTGCATGAATCAGTT
GATGTAAAAGAGCTTTCTGCTGCCATCCAGTGTTGTGATGAAGAATCAAGTCCAAGTTTT
GCTCCTCTTTCTACTGGAGGTTTTACAATCAACTTACCTCGACTAAAGCATAGATACCAG
ATTATTCTGCCCACCTCTTCCACCATCAGTGATGTCCTTAATTGTGTAAGAGTTACAGAC
TCTGTTGTGTTTCTTATTGGTTGCAATGACAATTGTATGGATAAAGTTGGGGTCCAGTTG
CTTGAGTGTTTGATCGCACAAGGCCTGCCAGCTTCAGTTTTCTATGTGCAAGGAATCGAC
AAAATGCCAATAAAACAAAGAAGTTCAACCAAGAAGGAAATTACAAAACAGATTGAGCAA
TACATGTCCGCTCCAAAACTTTTAACAGTTGACACACCACAAGAAACATTAAATCTGCTT
CGATGTGTCGGCGAAATGAAACATCGAGGAATAGGAATGAGAAGTGGTCGCTCCTATATG
TTGGTGGAGAAATCTGAGTTTGTTTGTGAAGATAATGAAAGTACTGGTACATTAAAGATA
TCTGGTCATGTTCGAGGATCAAGGTTAGATGTGAATAAGCTCGTTCATCTTGTTGGTTGG
GGAGATTTCCAAATTCAACAAATAGAAAAAATAGCGGAACATTGTCCATGGAAAATGTCA
AAAAATAGAAATCAGAATAATGAAATGTCCACAGATGAAAAAATGGTTTCGATCAGGGGT
GAGATGTATCAGCCATTTCAATCCTTTGATGAGTTCCTGTTACCGGATCCAGCTCAGCAG
CAAGATTTAACTCGAGAAGCAGAAGTCGATCCACTAGATGGAGAGCAAACCTGGCCTACA
GAGGAAGAATTACGTGAAGCTGAAGATACTTCTTCACTTCAGTCCAACAAAAAGAAACTT
CAAAAGCGAGTTCCTAAGGGAACATCCGATTATCAAGCTTCATGGATTCTGGATGAAAAT
GAAGACTGGGAGGAAGCAAGTGGATCAGAGATAGATGAAGATGCTTTTGAAGATAGGGAA
GAGTTCCAACCATGTGATGAGGAACTGTCACAGGCAGATGAGGATGAAGCTGAAACTGCA
TCTGTGATGATGAGCGAGATGGAGGACACTGCAAGTCAGTATGATGATAAGATGGAGGAT
GATCAGGATCAGCTTGCTCGATTCCGAGAGCAGAGAACGAATGAGATGTTCCCTGATGAA
ATCGACACACCAGCTACTGTGAATGCTAGAACTAGATTTCAGCGATACAGAGGTTTAAAA
AGTTTTCGAACGTCCCCTTGGGACCCAAAGGAAAACCTTCCTTCAGAATATGCCAGAATA
TTCCAGTTTCAATCATTCGAAAATATGAAAAAGAGGATTAAAAAGATGGAAACAGAAGAA
AACTCATCAGTAGAGGCTGGCACATATGTCACAGTTTATTTGAAGGATGTTCCAAAGTCA
TTTGTTAATCAGGCTTCCATGTTATCGACGATCACAATGTTCAGTTTGTTTCCTCATGAA
CAAAAGATGAGTGTTCTCCACTTCGCATTGAAATCTTGCACAGAGCGTTCAATAAAAAGC
AAAGATGAACTAATTTTCCATGTTGGATTTCGACAGTTTAAAGCCAGACCACTATTTTCT
CAACACACTGTCGGTTCCAAACACAAGCTGGAGAGATTTCTCCCTACTAGCGGTGTTGTT
GTGGCTTCTGTTTACGCCCCAATAACATTTCCCCCAGCAAATGTTGTTGCTTTTGTGAAG
GATCCAAATGGTGATTTAGAACAAGTAGCCAATGGAACTTTGTTTAAAGTTGATCCAGAT
CGTGTTGTGGTGAAGCGAATAGTATTAAGTGGACACCCGTTCAGAATCAACAAGCGTGCT
GCAACTATCCGATACATGTTTTTTAATCCAGATGATGTGTTGTGGTTTAAACCAGTGGAA
CTGAGGACAAAATGGGGACGCCGAGGTCACATCAAGGAACCTTTGGGCACACATGGCCAT
ATGAAATGCATATTTGATTCTCAACTCACATCCCAGGACACAGTAATGATGATGTTGTAT
AAACGGGTATTCCCTAAATGGTCTTACTGCCCTATAACACCCAATACTGAATCAGATGTT
GCGATGGAGGAATCTTTTGATGAAGAATTGTTCACATAA
| Pfam |
Atg5 (IPR007239) - T[77-159] 3.4E-22 |
| ProSiteProfiles |
G_Bms1/Tsr1_dom (IPR030387) - T[167-338] 19.148 |
| SMART |
AARP2CN (IPR012948) - T[315-395] 6.8E-23 |
| Pfam |
AARP2CN (IPR012948) - T[315-392] 2.0E-21 |
| SMART |
BMS1_TSR1_C (IPR007034) - T[580-863] 2.9E-160 |
| Pfam |
BMS1_TSR1_C (IPR007034) - T[581-865] 3.4E-119 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BMS1_HUMAN | 27.897 % | 90.9 | 1.66E-18 |
| TSR1_HUMAN | 46.143 % | 607 | 0 |
| ATG5_HUMAN | 44.156 % | 155 | 2.28E-42 |