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  1. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S855.g12391.02.t

Possible name(s)

ATG5; BMS1; TSR1

Gene model

Phmamm.CG.MTP2014.S855.g12391

Location

S855 [16,826 / 21,444]

Sequences

Amino acid sequence

Length: 600

>Phmamm.CG.MTP2014.S855.g12391.02.p
VAMAVTGISHKAGLWKQQNKSHKTGRHRSKGQIDVQNKGRVSVKNLSTKQRKVLQKASRR
NRSQQIRSLKREEVLNRKRLIGTGQSPPHLVTLIPLHESVDVKELSAAIQCCDEESSPSF
APLSTGGFTINLPRLKHRYQIILPTSSTISDVLNCVRVTDSVVFLIGCNDNCMDKVGVQL
LECLIAQGLPASVFYVQGIDKMPIKQRSSTKKEITKQIEQYMSAPKLLTVDTPQETLNLL
RCVGEMKHRGIGMRSGRSYMLVEKSEFVCEDNESTGTLKISGHVRGSRLDVNKLVHLVGW
GDFQIQQIEKIAEHCPWKMSKNRNQNNEMSTDEKMVSIRGEMYQPFQSFDEFLLPDPAQQ
QDLTREAEVDPLDGEQTWPTEEELREAEDTSSLQSNKKKLQKRVPKGTSDYQASWILDEN
EDWEEASGSEIDEDAFEDREEFQPCDEELSQADEDEAETASVMMSEMEDTASQYDDKMED
DQDQLARFREQRTNEMFPDEIDTPATVNARTRFQRYRGLKSFRTSPWDPKENLPSEYARI
FQFQSFENMKKRIKKMETEENSSVEAGTYVTVYLKDVPKSFVNQASMLSTITMFSLFPHE

Nucleotide sequence

Length: 1,803

>Phmamm.CG.MTP2014.S855.g12391.02.t
TGTGGCAATGGCTGTAACTGGAATAAGCCACAAAGCTGGGCTATGGAAACAACAAAATAA
GTCACACAAAACTGGGAGGCACAGAAGCAAAGGACAAATAGATGTACAGAACAAAGGTAG
AGTCAGTGTAAAGAACCTGTCGACAAAACAAAGAAAAGTCTTACAAAAAGCCTCTCGAAG
AAATCGCAGTCAACAAATAAGATCTTTAAAACGTGAAGAGGTTTTAAACAGAAAGAGGTT
AATTGGAACAGGTCAAAGCCCCCCACATTTGGTCACCCTAATTCCTTTGCATGAATCAGT
TGATGTAAAAGAGCTTTCTGCTGCCATCCAGTGTTGTGATGAAGAATCAAGTCCAAGTTT
TGCTCCTCTTTCTACTGGAGGTTTTACAATCAACTTACCTCGACTAAAGCATAGATACCA
GATTATTCTGCCCACCTCTTCCACCATCAGTGATGTCCTTAATTGTGTAAGAGTTACAGA
CTCTGTTGTGTTTCTTATTGGTTGCAATGACAATTGTATGGATAAAGTTGGGGTCCAGTT
GCTTGAGTGTTTGATCGCACAAGGCCTGCCAGCTTCAGTTTTCTATGTGCAAGGAATCGA
CAAAATGCCAATAAAACAAAGAAGTTCAACCAAGAAGGAAATTACAAAACAGATTGAGCA
ATACATGTCCGCTCCAAAACTTTTAACAGTTGACACACCACAAGAAACATTAAATCTGCT
TCGATGTGTCGGCGAAATGAAACATCGAGGAATAGGAATGAGAAGTGGTCGCTCCTATAT
GTTGGTGGAGAAATCTGAGTTTGTTTGTGAAGATAATGAAAGTACTGGTACATTAAAGAT
ATCTGGTCATGTTCGAGGATCAAGGTTAGATGTGAATAAGCTCGTTCATCTTGTTGGTTG
GGGAGATTTCCAAATTCAACAAATAGAAAAAATAGCGGAACATTGTCCATGGAAAATGTC
AAAAAATAGAAATCAGAATAATGAAATGTCCACAGATGAAAAAATGGTTTCGATCAGGGG
TGAGATGTATCAGCCATTTCAATCCTTTGATGAGTTCCTGTTACCGGATCCAGCTCAGCA
GCAAGATTTAACTCGAGAAGCAGAAGTCGATCCACTAGATGGAGAGCAAACCTGGCCTAC
AGAGGAAGAATTACGTGAAGCTGAAGATACTTCTTCACTTCAGTCCAACAAAAAGAAACT
TCAAAAGCGAGTTCCTAAGGGAACATCCGATTATCAAGCTTCATGGATTCTGGATGAAAA
TGAAGACTGGGAGGAAGCAAGTGGATCAGAGATAGATGAAGATGCTTTTGAAGATAGGGA
AGAGTTCCAACCATGTGATGAGGAACTGTCACAGGCAGATGAGGATGAAGCTGAAACTGC
ATCTGTGATGATGAGCGAGATGGAGGACACTGCAAGTCAGTATGATGATAAGATGGAGGA
TGATCAGGATCAGCTTGCTCGATTCCGAGAGCAGAGAACGAATGAGATGTTCCCTGATGA
AATCGACACACCAGCTACTGTGAATGCTAGAACTAGATTTCAGCGATACAGAGGTTTAAA
AAGTTTTCGAACGTCCCCTTGGGACCCAAAGGAAAACCTTCCTTCAGAATATGCCAGAAT
ATTCCAGTTTCAATCATTCGAAAATATGAAAAAGAGGATTAAAAAGATGGAAACAGAAGA
AAACTCATCAGTAGAGGCTGGCACATATGTCACAGTTTATTTGAAGGATGTTCCAAAGTC
ATTTGTTAATCAGGCTTCCATGTTATCGACGATCACAATGTTCAGTTTGTTTCCTCATGA
ACA

InterProScan

ProSiteProfiles
G_Bms1/Tsr1_dom (IPR030387) - T[87-258] 19.148
SMART
AARP2CN (IPR012948) - T[235-315] 6.8E-23
Pfam
AARP2CN (IPR012948) - T[235-312] 1.1E-21
SMART
BMS1_TSR1_C (IPR007034) - T[500-600] 2.0E-4
Pfam
BMS1_TSR1_C (IPR007034) - T[501-600] 4.8E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TSR1_HUMAN 40.067 % 400 4.46E-130