- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S855.g12396.01.t
Possible name(s)
TBX2; TBX4; TBX6
Gene model
Location
S855 [69,176 / 71,023]
Amino acid sequence
Length: 458
>Phmamm.CG.MTP2014.S855.g12396.01.p
MNNFQHCTAPWFQTTSETHLAQDVDEVYRTTVQDYQVYDKKYSQVVRSPYEENVQVDLQD
LEVWDKFSAAKTEMIVTKPGRRIFPGYRVKFSGLDPNAQYCVLMDVVNVDENRYKFKNGE
WIVSGRGEPKIPQKFYVHPKSPSSGGKLMKEVLSFHKVKLTNSFAHSATEKFNVHSMHRY
QLRVHLVRTDDVTMIKHEPMSTFSFSQTTFFTVTAYQNHEVTKLKIANNPFARGFRCDGG
KTKNTRRFCDVPEYFNCDVMQTNKRLKVAVPPNTNHVAATYTGYSNFQPHLSPQATDVPT
TCITANPTLHQYASSHPYSAPANVIHPRYLPGYDVSCTSPFSNTDQYNEHTAGNNSPQFT
QSSPRFTQQPEHQFSYPSPTYSQHSPQQFQPINNFDETNFVFPPQQTVNNQFSNNFDHFN
PNYVDSNNISPVSTDVNFFGPSSFSSEPVSPTYETLNY
Nucleotide sequence
Length: 1,377
>Phmamm.CG.MTP2014.S855.g12396.01.t
ATGAACAACTTTCAACATTGCACTGCTCCGTGGTTTCAAACAACATCCGAAACTCACTTA
GCGCAAGATGTTGATGAGGTATATCGAACAACTGTTCAAGATTATCAGGTTTATGACAAA
AAATATTCACAAGTGGTTCGATCTCCATATGAAGAGAATGTTCAAGTTGATCTTCAGGAT
CTTGAAGTTTGGGACAAATTTTCAGCCGCAAAAACCGAGATGATTGTCACAAAACCTGGA
AGGCGAATCTTTCCTGGTTACCGAGTGAAGTTCTCAGGTTTGGATCCGAACGCGCAGTAT
TGTGTCTTGATGGATGTTGTTAATGTTGACGAGAACAGATACAAGTTCAAGAACGGCGAA
TGGATTGTGTCTGGTCGAGGAGAGCCTAAAATTCCCCAGAAATTTTATGTTCACCCAAAG
TCACCATCCAGTGGCGGAAAACTAATGAAAGAAGTTCTTTCGTTCCACAAAGTGAAACTT
ACGAACTCATTTGCACATTCAGCAACTGAAAAGTTTAACGTTCACTCAATGCATCGTTAT
CAATTGCGCGTTCACCTTGTTCGAACTGATGACGTCACAATGATCAAGCATGAACCGATG
TCAACATTTTCATTTTCACAGACCACTTTTTTCACAGTGACAGCTTATCAAAATCACGAG
GTGACCAAACTTAAAATTGCCAACAATCCCTTTGCGCGAGGATTTCGGTGCGATGGTGGA
AAGACAAAAAACACCAGACGTTTCTGTGATGTTCCGGAATACTTCAATTGTGACGTCATG
CAGACAAACAAACGGCTGAAAGTGGCGGTTCCTCCCAACACCAACCATGTTGCTGCGACA
TACACTGGATATTCAAACTTCCAACCACATCTCTCTCCACAAGCGACCGACGTTCCCACC
ACTTGTATCACCGCCAACCCGACGCTGCACCAATACGCTTCATCTCATCCTTATTCCGCA
CCAGCAAACGTTATTCATCCGAGATACTTGCCGGGTTACGATGTGAGCTGTACGTCACCT
TTCAGCAACACTGACCAATACAACGAACATACCGCTGGAAACAACTCGCCACAGTTCACC
CAAAGTTCACCACGTTTTACCCAACAGCCGGAACACCAGTTTTCCTACCCATCACCAACC
TATTCGCAACATTCACCCCAGCAGTTTCAACCAATCAACAATTTTGACGAAACCAACTTT
GTTTTTCCACCACAACAAACAGTCAATAACCAATTTTCAAATAACTTCGATCACTTTAAT
CCGAATTATGTGGACTCAAACAATATTTCTCCAGTTTCTACTGATGTCAATTTCTTTGGT
CCGTCTAGTTTTTCTTCTGAACCTGTTTCACCTACTTATGAGACTCTTAACTATTGA
| PANTHER |
TF_T-box (IPR001699) - T[29-400] 2.6E-101 |
| Gene3D |
T-box_sf (IPR036960) - T[50-243] 1.5E-75 |
| CDD |
TF_T-box (IPR001699) - T[53-239] 2.40531E-91 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[53-236] 3.98E-64 |
| SMART |
TF_T-box (IPR001699) - T[53-241] 2.0E-92 |
| Pfam |
TF_T-box (IPR001699) - T[56-236] 6.4E-69 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[58-237] 63.281 |
| PRINTS |
TF_T-box (IPR001699) - T[71-95] 6.4E-33 - T[136-149] 6.4E-33 - T[153-162] 6.4E-33 - T[173-187] 6.4E-33 - T[208-221] 6.4E-33 - T[229-237] 6.4E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 47.423 % | 202 | 4.29E-60 |
| TBX2_HUMAN | 44.335 % | 202 | 8.37E-58 |
| TBX4_HUMAN | 46.597 % | 199 | 9.1E-58 |