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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S858.g12418.01.t

Possible name(s)

DPCD

Gene model

Phmamm.CG.MTP2014.S858.g12418

Location

S858 [60,354 / 61,845]

Sequences

Amino acid sequence

Length: 208

>Phmamm.CG.MTP2014.S858.g12418.01.p
MSKQQSKWVEMLKAARKTALVQDGKRKIHFTLADGTELCEEYDVKTNDLLVRKWRRKSTL
GASKPWEVEIGEPDVTAHMAALTLGSQHLMESNTNPICVRLDTRRAFQWRIRNLPYPLKT
YEITVDSDEKNIVVRTTNKKYFKKINIPDMERRELKLDSEDMNIAHANNTLIIQYQKPKC
ILDDQVLLLAEFKKLKTGKDGDMECNQS

Nucleotide sequence

Length: 724

>Phmamm.CG.MTP2014.S858.g12418.01.t
CTTGGAGTTTTGGTGACAAAAATTGACCTTGTGCCCTTTAAGTTTTATTTTATTTGGTTG
TTTTTAGGTGATTTTATTGTAGGCTTTGATTTGGCAGTATGTCGAAGCAGCAGTCCAAAT
GGGTGGAAATGTTAAAAGCTGCAAGAAAAACCGCACTGGTCCAAGATGGAAAACGAAAAA
TTCATTTTACCTTGGCGGATGGAACAGAGTTGTGTGAAGAATATGATGTAAAAACAAATG
ATCTATTAGTCAGAAAGTGGCGACGCAAATCCACCTTAGGTGCATCGAAACCGTGGGAAG
TTGAAATTGGTGAACCAGATGTAACTGCGCATATGGCTGCTCTTACTTTAGGGTCGCAAC
ATTTGATGGAAAGTAATACAAATCCAATTTGTGTACGTCTTGATACCAGAAGAGCTTTTC
AATGGAGAATACGAAATTTGCCCTATCCTCTCAAAACCTATGAGATCACTGTTGATTCAG
ATGAAAAAAATATTGTTGTGAGAACTACAAACAAAAAATACTTCAAAAAAATAAATATTC
CTGACATGGAACGGAGAGAGTTAAAATTGGACTCAGAAGATATGAATATTGCACATGCAA
ATAATACATTAATAATTCAGTACCAAAAACCGAAATGTATTTTGGATGACCAAGTGCTAC
TTCTCGCTGAGTTCAAGAAACTTAAAACAGGCAAGGATGGTGACATGGAATGCAATCAGA
GCTG

InterProScan

PANTHER
DPCD (IPR026224) - T[5-207] 4.7E-89
Pfam
DPCD (IPR026224) - T[8-199] 4.9E-81
PRINTS
DPCD (IPR026224) - T[38-55] 1.1E-29 - T[96-111] 1.1E-29 - T[111-126] 1.1E-29 - T[132-150] 1.1E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DPCD_HUMAN 53.535 % 224 6.78E-75