- Transcript 'KH2012:KH.C3.13.v1.A...' >
- Transcript 'Boleac.CG.SB_v3.S365...' >
- Clone 'cien202584' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S859.g12424.01.t
Possible name(s)
TOMM70; TTC1; TTC6
Gene model
Location
S859 [39,985 / 48,576]
Amino acid sequence
Length: 629
>Phmamm.CG.MTP2014.S859.g12424.01.p
MSDNLSSEGSWPTWKYVIAASIPVAICGAGLYYYLNTGKKETPKKLDSSPIKRFEPEGSS
SPNRPADVPLTPKAVVKPTKSELQQAQELKNEGNRLFKQGSFEEAIKKYSEAIEVCPDKH
NTEKSTYFQNKAAALEKMLDWEGVVRECTSAIQLNQRYVKALFRRGKALEKLHRKEECLE
DITTVCILEGFQNANSMVYADEMLKAIGKEKATEKYKGRKHTMPSSLFIKQYFASFNDDI
ISFPVTEDQKLQATESGYLRAKLDMEKSDYANVIDNCTKEIADGSKCCDDAGDKTEEPTA
NFVAEAYLLRGTFYLLLGDSEAARSDLQSVIDMKDVNVKLRANALIKRGSMNMQLQNTAQ
AESDFNEAVTIDPENCDVFHHRGQLRANALIKRGSMNMQLQNTAQAESDFNEAVTIDPEN
CDVFHHRGQLHILLDKVEDALADFDKCIQLKPEFAMAHAQRCYTNYRQSFAKKDVIQTQN
AVQQFEEIIKKYPTCSETYGLYAQAKTDSQDFEKADSLFKDAIKIEPENATLYVHRGLLA
LQWKQDIDAAVKLISQALEIDSKCDFAHETMGTIEVQRGNLDKAITHFGVAIDFAKSELE
MAHLFALQAAALAQGNIARKYGLRPPMPM
Nucleotide sequence
Length: 1,890
>Phmamm.CG.MTP2014.S859.g12424.01.t
ATGTCTGATAACTTGTCATCAGAAGGTTCCTGGCCAACTTGGAAATATGTAATCGCTGCC
AGCATACCTGTTGCAATATGTGGTGCTGGCCTGTATTACTACCTTAACACAGGTAAAAAG
GAAACCCCCAAAAAGCTAGACAGCAGTCCAATAAAGAGATTCGAACCTGAAGGCAGCTCA
TCACCTAACCGTCCAGCTGATGTTCCACTTACACCAAAAGCTGTTGTCAAGCCAACAAAG
TCGGAATTGCAACAAGCTCAAGAGTTGAAAAATGAAGGCAACAGATTGTTTAAGCAGGGT
TCATTTGAAGAAGCAATTAAGAAATATTCTGAGGCAATAGAAGTTTGTCCTGATAAACAC
AACACTGAAAAATCCACCTACTTTCAGAACAAAGCAGCAGCATTGGAAAAAATGTTGGAT
TGGGAAGGTGTGGTGAGAGAATGCACTTCTGCTATTCAGCTAAATCAACGATATGTAAAG
GCTCTCTTTAGAAGAGGCAAAGCACTTGAAAAGTTGCATCGAAAAGAGGAGTGCTTGGAA
GACATTACAACAGTTTGCATATTGGAGGGTTTTCAAAATGCCAATAGCATGGTGTATGCT
GATGAGATGCTCAAGGCAATTGGGAAAGAAAAGGCCACTGAAAAATACAAGGGGCGAAAG
CATACAATGCCATCTTCCCTTTTCATCAAACAATACTTTGCAAGCTTCAATGATGACATA
ATTTCTTTTCCAGTCACTGAAGATCAAAAATTGCAAGCCACTGAAAGCGGTTACTTGCGG
GCAAAGCTTGACATGGAAAAGAGTGATTACGCAAACGTAATTGACAATTGTACCAAGGAA
ATAGCTGACGGTTCAAAATGCTGTGACGACGCTGGCGACAAAACGGAAGAACCAACAGCT
AATTTCGTGGCGGAGGCATACTTGCTCCGAGGAACTTTTTACCTTCTCTTGGGAGATTCC
GAAGCCGCCCGATCCGATCTTCAAAGTGTCATCGATATGAAAGACGTCAACGTGAAGCTA
CGGGCCAACGCCCTTATAAAACGCGGGAGTATGAACATGCAACTGCAGAACACCGCACAG
GCTGAATCTGATTTCAACGAAGCTGTAACAATCGACCCAGAAAATTGTGACGTTTTTCAC
CATCGTGGACAGCTACGGGCCAACGCCCTTATAAAACGCGGGAGTATGAACATGCAACTG
CAGAACACCGCACAGGCTGAATCTGATTTCAACGAAGCTGTAACAATCGACCCAGAAAAT
TGTGACGTTTTTCACCATCGTGGACAGTTGCACATTCTATTGGACAAAGTGGAAGACGCT
CTCGCCGATTTTGACAAATGCATTCAACTGAAACCCGAATTTGCAATGGCTCACGCCCAA
CGTTGCTACACCAACTACAGACAATCCTTTGCTAAGAAAGACGTAATCCAAACTCAAAAC
GCCGTCCAACAATTCGAAGAAATAATCAAAAAATATCCCACATGTTCGGAAACATATGGT
CTGTATGCTCAGGCAAAAACGGACAGCCAGGATTTCGAAAAAGCCGATTCTTTATTCAAA
GATGCAATTAAAATTGAACCCGAGAACGCAACGTTGTATGTACACAGAGGATTGCTTGCT
CTGCAATGGAAACAAGACATCGACGCGGCGGTGAAACTTATTTCACAAGCTCTGGAAATT
GACAGCAAGTGTGATTTTGCTCACGAAACTATGGGCACGATAGAAGTACAAAGGGGAAAT
TTGGACAAAGCAATCACGCACTTTGGTGTGGCCATCGATTTTGCGAAGTCCGAACTGGAA
ATGGCACATCTCTTTGCACTGCAAGCCGCCGCTCTCGCACAAGGAAACATTGCTCGCAAA
TATGGACTTCGCCCCCCAATGCCCATGTGA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[74-189] 2.2E-29 - T[190-386] 4.9E-26 - T[387-623] 2.1E-57 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[85-185] 1.57E-22 - T[257-385] 7.25E-12 - T[336-600] 2.54E-27 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[86-119] 10.62 - T[304-337] 8.054 - T[342-375] 10.119 - T[387-420] 10.119 - T[421-454] 9.322 - T[496-529] 9.765 - T[565-598] 6.933 |
| SMART |
TPR_repeat (IPR019734) - T[86-119] 0.014 - T[125-158] 82.0 - T[159-192] 11.0 - T[304-337] 0.42 - T[342-375] 0.0028 - T[387-420] 0.0028 - T[421-454] 0.0033 - T[496-529] 47.0 - T[530-564] 48.0 - T[565-598] 290.0 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[86-192] 11.416 - T[304-598] 40.79 |
| Pfam |
TPR_repeat (IPR019734) - T[304-334] 0.031 - T[342-375] 0.0072 - T[387-420] 0.0072 - T[423-453] 0.08 - T[497-529] 0.026 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TOM70_HUMAN | 47.867 % | 563 | 0 |
| TTC1_HUMAN | 40.196 % | 80.9 | 9.43E-17 |