Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S85.g02823.01.t

Possible name(s)

FDPS; GGPS1; PDSS1

Gene model

Phmamm.CG.MTP2014.S85.g02823

Location

S85 [111,573 / 112,704]

Sequences

Amino acid sequence

Length: 260

>Phmamm.CG.MTP2014.S85.g02823.01.p
MTSELWKTFEDHFPKVVQALSSPDGKHAGNGITWSYERIKEVLEYNVPFGKRTRGLTVVS
SFKLLMGNCSQEELEIALSVGWAVEILQASFLVADDVMDQSQTRRGQLCWFRKPGIGLQA
INDSMILESCVFSILRLFCRKKSFYADLVDLFHQVILNTEMGQSLDMLTSEQPTLDLKEF
TPDRYAAMIKYKTAYYSFYLPVAVAMYMAGISDAESHEQSCSILCKIGSLFQIQDDYLDL
YGDPAVTGKIGTDIEESKCS

Nucleotide sequence

Length: 789

>Phmamm.CG.MTP2014.S85.g02823.01.t
ATGACATCAGAACTGTGGAAAACATTTGAAGATCATTTTCCAAAAGTTGTACAAGCTCTG
TCATCTCCTGATGGCAAACATGCTGGGAATGGCATTACATGGAGTTATGAGAGAATTAAG
GAGGTTTTGGAATACAATGTTCCTTTTGGTAAAAGAACCCGTGGTTTGACTGTTGTTTCT
TCATTTAAATTGCTAATGGGCAACTGTTCACAAGAAGAACTAGAAATCGCTTTGAGTGTG
GGATGGGCTGTTGAAATATTGCAAGCATCATTTTTAGTGGCTGATGATGTTATGGACCAA
TCTCAAACACGTAGAGGACAACTGTGCTGGTTTCGTAAACCTGGAATTGGACTACAGGCC
ATTAATGACAGTATGATTCTTGAGTCATGTGTATTTTCTATCCTAAGACTGTTTTGTCGC
AAAAAATCATTCTATGCTGATTTAGTGGACTTATTTCATCAAGTTATACTGAACACCGAA
ATGGGGCAAAGTCTAGACATGCTAACATCAGAGCAACCAACTTTGGACTTGAAAGAATTT
ACTCCTGATAGATATGCTGCCATGATCAAGTACAAAACTGCTTACTACTCATTTTATTTA
CCAGTGGCTGTGGCAATGTACATGGCAGGCATTTCAGATGCTGAATCTCATGAGCAGAGC
TGTAGCATTTTGTGTAAAATTGGGTCCCTTTTCCAAATACAGGATGATTATTTAGACCTT
TACGGTGATCCTGCTGTAACTGGCAAAATTGGAACTGATATTGAAGAATCTAAATGTTCC
TGAAGTTGA

InterProScan

Gene3D	Isoprenoid_synthase_dom_sf (IPR008949) - T[2-260] 1.5E-78
SUPERFAMILY	Isoprenoid_synthase_dom_sf (IPR008949) - T[6-260] 1.98E-66
Pfam	Polyprenyl_synt (IPR000092) - T[38-260] 1.7E-73
ProSitePatterns	Polyprenyl_synt_CS (IPR033749) - T[92-106] . - T[227-239] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FPPS_HUMAN	53.101 %	287	5.26E-96