- Transcript 'Phfumi.CG.MTP2014.S8...' >
- EST 'AHC0AAA232YK07_RM1' >
- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'Boleac.CG.SB_v3.S326...' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S85.g02839.01.t
Possible name(s)
ADAMTS16; ADAMTS18; ADAMTSL5
Gene model
Location
S85 [233,689 / 246,107]
Amino acid sequence
Length: 604
>Phmamm.CG.MTP2014.S85.g02839.01.p
AKFFLVVLCVSISEAQDFDQTASDVYHPAMHRVGTRRRSEEVSKQNRDDVYQPVQVQPNA
YFEAINEFAELEPDEFSQQDWSMWTEWSFCSRSCGGGVAMRTRRCGIRTLEDAIRDCSGD
DVEHQICNSMDCEGISSDFRATQCSHYDTVDRYDTKQLRWHPHYVDWHMICSDLVDAEPC
NLYCMARGFYFYKSFGLVMDGTRCRRENNGICISGECVRVGCNNVLGSNLTNDACGVCGG
DNSTCTFFKGVAEMNSNAAKFDYNVAKLIPAGATHIRVRESSKNYLALVEAEGPYLNYVL
NDKYLISWSVDLTAAGTEFRYERAKDDIEETLVAEGPTTTDLYIMVLYLSGEPNVEYEYW
LPKNRARESPSDEQDYEFMSPYSPPSTKASTTTSVTTTTAAPTTTTTTTEATTTTARTRN
VPQVKPTNKKRKKPSYCTPCKKPSSRKRHFCQSDFVIHARVQSKKKVEGKRFSHDVLIKT
VYKSDFKLMKREYIWVYSSCCPKLRPYRDYLIMGRKRRIERTPDSNGIVQFVGNATAGEN
YETRLVVDHMDYWHFWKRKYADGMRKVSNSNICDNFKFPTRSNILRDPEQRRAPRKPRRR
RTGS
Nucleotide sequence
Length: 2,178
>Phmamm.CG.MTP2014.S85.g02839.01.t
GCCAAGTTCTTCTTGGTTGTGCTGTGTGTCTCCATTAGCGAGGCACAGGATTTTGACCAG
ACTGCAAGTGATGTGTATCATCCGGCTATGCATCGAGTTGGAACGAGACGAAGGAGTGAA
GAAGTGTCAAAGCAGAATCGTGATGACGTTTACCAGCCAGTTCAAGTGCAACCCAATGCT
TACTTTGAAGCAATCAATGAGTTCGCTGAGCTGGAGCCTGACGAGTTTTCGCAGCAGGAT
TGGAGCATGTGGACGGAGTGGTCGTTCTGCTCCCGATCCTGCGGAGGCGGGGTTGCCATG
AGAACCAGACGATGCGGCATAAGAACGCTAGAAGACGCGATTCGCGACTGTTCGGGTGAC
GACGTTGAGCACCAGATCTGTAATTCAATGGACTGCGAAGGAATTTCAAGCGACTTTCGC
GCCACCCAGTGCTCACACTACGATACAGTGGATCGTTATGACACCAAGCAACTCCGGTGG
CACCCACACTACGTTGATTGGCACATGATTTGTTCTGATTTAGTTGATGCCGAACCGTGC
AACCTTTACTGCATGGCCAGAGGATTCTACTTCTACAAGAGCTTTGGTCTGGTGATGGAC
GGGACTCGGTGTAGAAGAGAAAACAACGGAATCTGCATCAGTGGAGAATGTGTGAGAGTT
GGCTGCAACAACGTGCTTGGTTCAAACTTGACCAATGACGCGTGTGGAGTTTGTGGTGGT
GACAACTCGACCTGCACCTTTTTCAAGGGAGTTGCAGAGATGAACTCAAATGCGGCAAAG
TTCGACTACAATGTGGCGAAGCTGATTCCGGCAGGAGCAACGCACATCAGAGTACGAGAG
TCATCCAAGAATTATTTGGCGCTTGTCGAGGCCGAGGGACCTTATCTTAACTATGTGCTG
AATGACAAGTACCTCATCAGCTGGTCGGTGGACTTGACTGCAGCCGGAACGGAGTTCAGA
TATGAACGAGCAAAAGATGATATTGAAGAGACACTTGTTGCTGAAGGTCCAACCACCACG
GATCTATACATCATGGTGCTGTATCTCAGCGGTGAACCGAACGTGGAATACGAGTATTGG
CTGCCGAAGAACCGCGCAAGGGAATCACCTTCGGACGAACAGGACTACGAATTTATGTCT
CCCTATTCACCACCAAGCACAAAAGCAAGCACCACTACCTCCGTTACCACAACAACAGCG
GCTCCAACTACCACAACGACTACTACAGAAGCCACTACAACCACCGCACGAACTCGAAAT
GTACCTCAAGTAAAACCCACAAACAAAAAACGAAAGAAGCCTTCATACTGCACCCCATGC
AAGAAGCCGAGCAGCCGAAAGCGTCATTTTTGTCAAAGTGATTTCGTTATTCATGCTCGT
GTTCAATCCAAGAAGAAGGTGGAGGGCAAACGCTTTAGTCACGATGTGCTGATCAAGACT
GTGTACAAGTCCGACTTTAAACTGATGAAACGCGAATACATCTGGGTGTACAGCAGTTGC
TGCCCTAAACTGCGACCATACCGCGACTACCTGATCATGGGTCGAAAGCGTAGAATCGAA
CGCACCCCTGACAGTAACGGCATTGTTCAATTTGTTGGTAACGCAACGGCTGGTGAAAAT
TATGAAACACGCCTGGTGGTCGACCACATGGACTATTGGCATTTCTGGAAGCGAAAGTAC
GCAGATGGTATGCGCAAAGTGTCTAACAGCAATATCTGCGACAACTTCAAGTTTCCAACT
CGTTCCAACATCTTGCGCGATCCAGAACAACGTCGTGCACCGCGAAAACCTAGACGACGA
AGGACTGGCTCCTGAATTTTAAACTGGTAGCTGAAAGAAACGGTGAAAAGAGCCTCAGTG
CTGTTGGCCCGGCGATTAAGCAGATTAAAAAAACACTCTGACTGCGGTCTGATCGACGAG
GCTTAGAATCTTGGCCAAATATTGCAGTCGTGTTTGTACTGAACTGCTTCAGATACTATT
CCAAGCCACAATCATTATGATAGGGTGGCGCGAAATGTCACTTGACGTGCAACGGTCAGG
TATAAGGTTCAACTGTCAGCATACAAAGCCCATCAACCACAATGTTGTCTATCCTTTTTA
GATCTGCGTTTTCTATGGTTTGTGCAGCTTTCACAACTCGGTGCTGTATTTTATTGAACA
GTTGCACCACAACTAAAG
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[77-132] 1.2E-11 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[78-133] 11.706 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[80-132] 3.66E-10 |
| SMART |
TSP1_rpt (IPR000884) - T[81-133] 1.1E-5 |
| Pfam |
TSP1_rpt (IPR000884) - T[82-132] 1.5E-9 |
| Pfam |
ADAM_spacer1 (IPR010294) - T[256-362] 6.3E-21 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[436-574] 2.35E-17 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[437-573] 14.594 |
| SMART |
Netrin_module_non-TIMP (IPR018933) - T[447-544] 1.6E-4 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[449-524] 1.9E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATS18_HUMAN | 38 % | 184 | 4.22E-49 |
| ATS16_HUMAN | 35.216 % | 189 | 7.1E-51 |
| ATL5_HUMAN | 34.404 % | 234 | 2.15E-70 |