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  1. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S85.g02839.02.t

Possible name(s)

ADAMTS16; ADAMTS18; ADAMTSL5

Location

S85 [234,052 / 246,113]

Sequences

Amino acid sequence

Length: 591

>Phmamm.CG.MTP2014.S85.g02839.02.p
MWAKFFLVVLCVSISEAQDFDQTASDVYHPAMHRVGTRRRSEEVSKQNRDDVYQPVQVQP
NAYFEAINEFAELEPDEFSQQDWSMWTEWSFCSRSCGGGVAMRTRRCGIRCVQFWTLYKL
LDQKRTLEDAIRDCSGDDVEHQICNSMDCEGISSDFRATQCSHYDTVDRYDTKQLRWHPH
YVDAEPCNLYCMARGFYFYKSFGLVMDGTRCRRENNGICISGECVRVGCNNVLGSNLTND
ACGVCGGDNSTCTFFKGVAEMNSNAAKFDYNVAKLIPAGATHIRVRESSKNYLALVEAEG
PYLNYVLNDKYLISWSVDLTAAGTEFRYERAKDDIEETLVAEGPTTTDLYIMVSYIFSAR
ESPSDEQDYEFMSPYSPPSTKASTTTSVTTTTAAPTTTTTTTEATTTTARTRNVPQKRKK
PSYCTPCKKPSSRKRHFCQSDFVIHARVQSKKKVEGKRFSHDVLIKTVYKSDFKLMKREY
IWVYSSCCPKLRPYRDYLIMGRKRRIERTPDSNGIVQFVGNATAGENYETRLVVDHMDYW
HFWKRKYADGMRKVSNSNICDNFKFPTRSNILRDPEQRRAPRKPRRRRTGS

Nucleotide sequence

Length: 1,776

>Phmamm.CG.MTP2014.S85.g02839.02.t
ATGTGGGCCAAGTTCTTCTTGGTTGTGCTGTGTGTCTCCATTAGCGAGGCACAGGATTTT
GACCAGACTGCAAGTGATGTGTATCATCCGGCTATGCATCGAGTTGGAACGAGACGAAGG
AGTGAAGAAGTGTCAAAGCAGAATCGTGATGACGTTTACCAGCCAGTTCAAGTGCAACCC
AATGCTTACTTTGAAGCAATCAATGAGTTCGCTGAGCTGGAGCCTGACGAGTTTTCGCAG
CAGGATTGGAGCATGTGGACGGAGTGGTCGTTCTGCTCCCGATCCTGCGGAGGCGGGGTT
GCCATGAGAACCAGACGATGCGGCATAAGGTGTGTACAATTTTGGACATTGTACAAACTA
CTAGACCAAAAAAGAACGCTAGAAGACGCGATTCGCGACTGTTCGGGTGACGACGTTGAG
CACCAGATCTGTAATTCAATGGACTGCGAAGGAATTTCAAGCGACTTTCGCGCCACCCAG
TGCTCACACTACGATACAGTGGATCGTTATGACACCAAGCAACTCCGGTGGCACCCACAC
TACGTTGATGCCGAACCGTGCAACCTTTACTGCATGGCCAGAGGATTCTACTTCTACAAG
AGCTTTGGTCTGGTGATGGACGGGACTCGGTGTAGAAGAGAAAACAACGGAATCTGCATC
AGTGGAGAATGTGTGAGAGTTGGCTGCAACAACGTGCTTGGTTCAAACTTGACCAATGAC
GCGTGTGGAGTTTGTGGTGGTGACAACTCGACCTGCACCTTTTTCAAGGGAGTTGCAGAG
ATGAACTCAAATGCGGCAAAGTTCGACTACAATGTGGCGAAGCTGATTCCGGCAGGAGCA
ACGCACATCAGAGTACGAGAGTCATCCAAGAATTATTTGGCGCTTGTCGAGGCCGAGGGA
CCTTATCTTAACTATGTGCTGAATGACAAGTACCTCATCAGCTGGTCGGTGGACTTGACT
GCAGCCGGAACGGAGTTCAGATATGAACGAGCAAAAGATGATATTGAAGAGACACTTGTT
GCTGAAGGTCCAACCACCACGGATCTATACATCATGGTGAGCTATATATTTTCAGCAAGG
GAATCACCTTCGGACGAACAGGACTACGAATTTATGTCTCCCTATTCACCACCAAGCACA
AAAGCAAGCACCACTACCTCCGTTACCACAACAACAGCGGCTCCAACTACCACAACGACT
ACTACAGAAGCCACTACAACCACCGCACGAACTCGAAATGTACCTCAAAAACGAAAGAAG
CCTTCATACTGCACCCCATGCAAGAAGCCGAGCAGCCGAAAGCGTCATTTTTGTCAAAGT
GATTTCGTTATTCATGCTCGTGTTCAATCCAAGAAGAAGGTGGAGGGCAAACGCTTTAGT
CACGATGTGCTGATCAAGACTGTGTACAAGTCCGACTTTAAACTGATGAAACGCGAATAC
ATCTGGGTGTACAGCAGTTGCTGCCCTAAACTGCGACCATACCGCGACTACCTGATCATG
GGTCGAAAGCGTAGAATCGAACGCACCCCTGACAGTAACGGCATTGTTCAATTTGTTGGT
AACGCAACGGCTGGTGAAAATTATGAAACACGCCTGGTGGTCGACCACATGGACTATTGG
CATTTCTGGAAGCGAAAGTACGCAGATGGTATGCGCAAAGTGTCTAACAGCAATATCTGC
GACAACTTCAAGTTTCCAACTCGTTCCAACATCTTGCGCGATCCAGAACAACGTCGTGCA
CCGCGAAAACCTAGACGACGAAGGACTGGCTCCTGA

InterProScan

Gene3D
TSP1_rpt_sf (IPR036383) - T[79-149] 1.2E-10
ProSiteProfiles
TSP1_rpt (IPR000884) - T[80-150] 11.263
SUPERFAMILY
TSP1_rpt_sf (IPR036383) - T[82-111] 5.49E-6
SMART
TSP1_rpt (IPR000884) - T[83-150] 1.3E-4
Pfam
TSP1_rpt (IPR000884) - T[84-107] 1.4E-4
Pfam
ADAM_spacer1 (IPR010294) - T[263-372] 3.4E-17
SUPERFAMILY
TIMP-like_OB-fold (IPR008993) - T[423-561] 2.2E-17
ProSiteProfiles
Netrin_domain (IPR001134) - T[424-560] 14.594
SMART
Netrin_module_non-TIMP (IPR018933) - T[434-531] 1.6E-4
Pfam
Netrin_module_non-TIMP (IPR018933) - T[436-511] 1.9E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATS6_HUMAN 31.566 % 170 1.37E-44
ATS18_HUMAN 37.188 % 170 1.09E-44
ATL5_HUMAN 33.806 % 219 8.7E-65