- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S85.g02839.02.t
Possible name(s)
ADAMTS16; ADAMTS18; ADAMTSL5
Gene model
Location
S85 [234,052 / 246,113]
Amino acid sequence
Length: 591
>Phmamm.CG.MTP2014.S85.g02839.02.p
MWAKFFLVVLCVSISEAQDFDQTASDVYHPAMHRVGTRRRSEEVSKQNRDDVYQPVQVQP
NAYFEAINEFAELEPDEFSQQDWSMWTEWSFCSRSCGGGVAMRTRRCGIRCVQFWTLYKL
LDQKRTLEDAIRDCSGDDVEHQICNSMDCEGISSDFRATQCSHYDTVDRYDTKQLRWHPH
YVDAEPCNLYCMARGFYFYKSFGLVMDGTRCRRENNGICISGECVRVGCNNVLGSNLTND
ACGVCGGDNSTCTFFKGVAEMNSNAAKFDYNVAKLIPAGATHIRVRESSKNYLALVEAEG
PYLNYVLNDKYLISWSVDLTAAGTEFRYERAKDDIEETLVAEGPTTTDLYIMVSYIFSAR
ESPSDEQDYEFMSPYSPPSTKASTTTSVTTTTAAPTTTTTTTEATTTTARTRNVPQKRKK
PSYCTPCKKPSSRKRHFCQSDFVIHARVQSKKKVEGKRFSHDVLIKTVYKSDFKLMKREY
IWVYSSCCPKLRPYRDYLIMGRKRRIERTPDSNGIVQFVGNATAGENYETRLVVDHMDYW
HFWKRKYADGMRKVSNSNICDNFKFPTRSNILRDPEQRRAPRKPRRRRTGS
Nucleotide sequence
Length: 1,776
>Phmamm.CG.MTP2014.S85.g02839.02.t
ATGTGGGCCAAGTTCTTCTTGGTTGTGCTGTGTGTCTCCATTAGCGAGGCACAGGATTTT
GACCAGACTGCAAGTGATGTGTATCATCCGGCTATGCATCGAGTTGGAACGAGACGAAGG
AGTGAAGAAGTGTCAAAGCAGAATCGTGATGACGTTTACCAGCCAGTTCAAGTGCAACCC
AATGCTTACTTTGAAGCAATCAATGAGTTCGCTGAGCTGGAGCCTGACGAGTTTTCGCAG
CAGGATTGGAGCATGTGGACGGAGTGGTCGTTCTGCTCCCGATCCTGCGGAGGCGGGGTT
GCCATGAGAACCAGACGATGCGGCATAAGGTGTGTACAATTTTGGACATTGTACAAACTA
CTAGACCAAAAAAGAACGCTAGAAGACGCGATTCGCGACTGTTCGGGTGACGACGTTGAG
CACCAGATCTGTAATTCAATGGACTGCGAAGGAATTTCAAGCGACTTTCGCGCCACCCAG
TGCTCACACTACGATACAGTGGATCGTTATGACACCAAGCAACTCCGGTGGCACCCACAC
TACGTTGATGCCGAACCGTGCAACCTTTACTGCATGGCCAGAGGATTCTACTTCTACAAG
AGCTTTGGTCTGGTGATGGACGGGACTCGGTGTAGAAGAGAAAACAACGGAATCTGCATC
AGTGGAGAATGTGTGAGAGTTGGCTGCAACAACGTGCTTGGTTCAAACTTGACCAATGAC
GCGTGTGGAGTTTGTGGTGGTGACAACTCGACCTGCACCTTTTTCAAGGGAGTTGCAGAG
ATGAACTCAAATGCGGCAAAGTTCGACTACAATGTGGCGAAGCTGATTCCGGCAGGAGCA
ACGCACATCAGAGTACGAGAGTCATCCAAGAATTATTTGGCGCTTGTCGAGGCCGAGGGA
CCTTATCTTAACTATGTGCTGAATGACAAGTACCTCATCAGCTGGTCGGTGGACTTGACT
GCAGCCGGAACGGAGTTCAGATATGAACGAGCAAAAGATGATATTGAAGAGACACTTGTT
GCTGAAGGTCCAACCACCACGGATCTATACATCATGGTGAGCTATATATTTTCAGCAAGG
GAATCACCTTCGGACGAACAGGACTACGAATTTATGTCTCCCTATTCACCACCAAGCACA
AAAGCAAGCACCACTACCTCCGTTACCACAACAACAGCGGCTCCAACTACCACAACGACT
ACTACAGAAGCCACTACAACCACCGCACGAACTCGAAATGTACCTCAAAAACGAAAGAAG
CCTTCATACTGCACCCCATGCAAGAAGCCGAGCAGCCGAAAGCGTCATTTTTGTCAAAGT
GATTTCGTTATTCATGCTCGTGTTCAATCCAAGAAGAAGGTGGAGGGCAAACGCTTTAGT
CACGATGTGCTGATCAAGACTGTGTACAAGTCCGACTTTAAACTGATGAAACGCGAATAC
ATCTGGGTGTACAGCAGTTGCTGCCCTAAACTGCGACCATACCGCGACTACCTGATCATG
GGTCGAAAGCGTAGAATCGAACGCACCCCTGACAGTAACGGCATTGTTCAATTTGTTGGT
AACGCAACGGCTGGTGAAAATTATGAAACACGCCTGGTGGTCGACCACATGGACTATTGG
CATTTCTGGAAGCGAAAGTACGCAGATGGTATGCGCAAAGTGTCTAACAGCAATATCTGC
GACAACTTCAAGTTTCCAACTCGTTCCAACATCTTGCGCGATCCAGAACAACGTCGTGCA
CCGCGAAAACCTAGACGACGAAGGACTGGCTCCTGA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[79-149] 1.2E-10 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[80-150] 11.263 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[82-111] 5.49E-6 |
| SMART |
TSP1_rpt (IPR000884) - T[83-150] 1.3E-4 |
| Pfam |
TSP1_rpt (IPR000884) - T[84-107] 1.4E-4 |
| Pfam |
ADAM_spacer1 (IPR010294) - T[263-372] 3.4E-17 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[423-561] 2.2E-17 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[424-560] 14.594 |
| SMART |
Netrin_module_non-TIMP (IPR018933) - T[434-531] 1.6E-4 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[436-511] 1.9E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATS6_HUMAN | 31.566 % | 170 | 1.37E-44 |
| ATS18_HUMAN | 37.188 % | 170 | 1.09E-44 |
| ATL5_HUMAN | 33.806 % | 219 | 8.7E-65 |