- Transcript 'Cisavi.CG.ENS81.R417...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S861.g12431.01.t
Possible name(s)
NLRC3; NOD2; RNH1
Gene model
Location
S861 [9,386 / 11,540]
Amino acid sequence
Length: 225
>Phmamm.CG.MTP2014.S861.g12431.01.p
MRTLNLSRNKIGDEEMILLAPCLHNLQELKICECGIGSEGVCRISEKIQSLENPLKNLGI
SKNKFGDSGARLLACCLHNIKEIELRGCEIGSSGMTAIADKIKVLTTPMACLNLSLNIIG
DLGVSSLANCIHNIQILVLCDCEIGGNGVKALAEKICELQQPMRNLNLSRNKFGDLGATW
LARCICNVQELELWDCGIGFLGTEALTKTIENLEKPVSAMSMILL
Nucleotide sequence
Length: 678
>Phmamm.CG.MTP2014.S861.g12431.01.t
ATGAGGACTTTGAATCTGTCGAGAAACAAAATTGGGGACGAAGAAATGATTCTACTTGCC
CCCTGTCTACACAATCTTCAAGAGCTAAAAATATGTGAATGTGGTATTGGAAGCGAAGGT
GTGTGCAGAATTTCCGAAAAAATTCAATCACTCGAAAATCCGTTGAAGAACCTTGGGATT
TCCAAAAACAAGTTTGGAGATTCTGGAGCGCGCTTGTTGGCCTGTTGCCTCCACAACATA
AAAGAAATTGAACTGCGCGGTTGTGAGATTGGAAGCAGTGGAATGACAGCAATTGCTGAT
AAGATCAAAGTACTGACTACTCCTATGGCTTGTCTAAATCTTTCACTAAATATTATTGGA
GACTTGGGTGTGAGTTCGCTCGCTAACTGCATTCACAACATACAGATATTGGTGTTGTGT
GATTGCGAGATTGGTGGAAATGGTGTGAAGGCGCTTGCAGAAAAAATATGCGAATTACAA
CAACCTATGAGAAATCTCAACCTTTCTCGCAACAAGTTTGGTGACTTGGGAGCCACTTGG
CTTGCCCGCTGCATTTGTAACGTCCAAGAATTGGAGCTGTGGGACTGTGGAATCGGTTTT
CTTGGCACCGAAGCACTCACCAAAACGATAGAAAATCTGGAAAAGCCAGTAAGTGCTATG
TCGATGATCCTGTTGTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[1-108] 9.2E-20 - T[109-216] 2.7E-19 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[1-14] 0.028 - T[55-74] 0.063 - T[78-99] 0.033 - T[111-128] 0.22 - T[133-153] 0.72 - T[163-179] 0.13 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[23-47] 40.0 - T[77-101] 16.0 - T[131-155] 49.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|