Aniseed - Transcript Card

Transcript 'KH2012:KH.C9.65.v4.A...' >
Transcript 'KH2012:KH.C1.1.v1.A....' >
Transcript 'KH2012:KH.C9.176.v1....' >
Transcript 'Harore.CG.MTP2014.S7...' >
Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S864.g12449.01.t

Possible name(s)

AL928654.3; CRIP1; CRIP2

Gene model

Phmamm.CG.MTP2014.S864.g12449

Location

S864 [2,960 / 6,372]

Sequences

Amino acid sequence

Length: 62

>Phmamm.CG.MTP2014.S864.g12449.01.p
EKVTSLGKDWHRPCLKCEKCKKTLSSGSHAEHQGKPYCHNPCYAATFGPKGFGRGGAESH
AY

Nucleotide sequence

Length: 189

>Phmamm.CG.MTP2014.S864.g12449.01.t
GAGAAAGTGACATCTCTTGGAAAAGATTGGCACCGCCCATGCCTGAAATGCGAAAAATGT
AAAAAGACACTGTCCAGTGGAAGCCATGCCGAGCACCAAGGAAAGCCCTACTGCCACAAT
CCGTGCTATGCTGCTACGTTTGGACCGAAAGGTTTTGGACGTGGAGGTGCGGAGAGTCAC
GCATACTAA

InterProScan

ProSiteProfiles	Znf_LIM (IPR001781) - T[1-49] 10.999
SMART	Znf_LIM (IPR001781) - T[1-41] 0.0012
Pfam	Znf_LIM (IPR001781) - T[4-46] 1.1E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CRIP1_HUMAN	83.871 %	113	3.47E-35
CRIP2_HUMAN	67.742 %	95.5	1.15E-26
CRIP3_HUMAN	64.516 %	88.6	7.34E-24