- Transcript 'Moocci.CG.ELv1_2.S42...' >
- Transcript 'Phmamm.CG.MTP2014.S7...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S865.g12456.01.t
Possible name(s)
CRIM1; FRAS1; SPON1
Gene model
Location
S865 [18,531 / 29,588]
Amino acid sequence
Length: 514
>Phmamm.CG.MTP2014.S865.g12456.01.p
MTKAVLLTLATLLLATSTYSARLANIRVTRNLDESETSIEANFDLDTEDTERRHHQHVRH
HRLNDVIVGNFTFPDEVPKVEETNYILLNCTVKNRFSLFSAQMCEQGLLADDNQVTWHNE
DCHTCRCQGATAICQQETCPSLDCQHPVSVENKCCPMCPDQVCKAADGRFFAEGADWHLD
DCTFCECKQGRVLCSIEDCEFKSCKTPHKVPGRCCPVCPDTSCYENNGMNHTAGTVWKEG
TCYIGFHNCSSEKKPTSLLLLCVRFFLKLYVCTHCYCGNGEKLCAEEKCPHINCTNPYQP
EGQCCLKCLDAIECVVSTWGDWGECPIQECGGGMRRRYRSVVIPPRNGGAFCPHMSEAQL
CPRTPCNDIPVCPVTKWSTWSHCTATCDEPADTSHCQNLAWSAWSKCSKSCGRGNKVRQQ
IPANTSTKHGERCHLLQMVKKCHGHNCSFFHGEEGCVSDDGQTHYDENESWISEDCLTCR
CVNSVKQCGLDCSKLGCEDPSNYDRGCCSLCATF
Nucleotide sequence
Length: 1,545
>Phmamm.CG.MTP2014.S865.g12456.01.t
ATGACTAAAGCAGTCTTATTAACGCTAGCAACCTTGCTATTAGCCACAAGCACTTATTCT
GCCCGTCTAGCCAACATCCGGGTTACCCGTAACCTTGACGAATCAGAAACAAGCATTGAA
GCAAACTTTGACTTGGATACGGAAGATACGGAACGACGTCATCACCAGCACGTACGTCAT
CATCGTTTAAATGACGTCATCGTGGGAAATTTTACGTTTCCGGATGAAGTTCCAAAGGTT
GAGGAAACCAACTACATATTGTTGAATTGTACTGTTAAAAACCGTTTTTCTTTATTTTCA
GCACAAATGTGTGAACAAGGATTACTTGCCGATGACAACCAAGTGACATGGCACAACGAG
GACTGCCACACTTGCCGCTGCCAAGGTGCCACTGCCATCTGTCAGCAGGAGACCTGTCCA
AGTTTAGACTGCCAGCATCCTGTGTCAGTTGAAAACAAATGCTGCCCAATGTGTCCAGAC
CAAGTTTGCAAAGCAGCCGATGGTCGTTTCTTTGCGGAAGGCGCTGATTGGCATTTAGAC
GACTGCACATTTTGTGAATGCAAACAGGGCAGGGTTCTATGTTCCATCGAAGACTGTGAA
TTCAAATCCTGCAAAACACCCCACAAAGTTCCTGGCCGATGTTGCCCTGTATGTCCTGAT
ACATCTTGTTATGAAAACAACGGAATGAACCACACAGCTGGAACTGTGTGGAAGGAAGGT
ACTTGTTATATAGGTTTTCATAATTGTTCTTCAGAAAAAAAACCAACCTCTTTGTTGCTT
CTGTGTGTTCGATTTTTCCTCAAGCTGTACGTTTGTACCCATTGCTATTGCGGCAACGGA
GAAAAGCTCTGTGCTGAAGAAAAATGTCCGCATATTAACTGTACGAATCCTTACCAACCC
GAAGGCCAGTGCTGCCTAAAATGTTTAGATGCGATCGAATGTGTTGTGTCGACTTGGGGT
GACTGGGGTGAATGTCCCATACAAGAATGTGGGGGCGGAATGAGAAGAAGATACAGAAGT
GTGGTGATTCCCCCCAGAAACGGGGGTGCTTTCTGTCCCCATATGAGTGAGGCGCAGCTT
TGTCCTAGAACTCCGTGCAATGATATCCCAGTTTGTCCTGTCACCAAATGGAGTACATGG
AGCCACTGTACCGCCACTTGCGATGAACCTGCTGATACGAGCCACTGTCAAAATCTGGCT
TGGTCAGCTTGGAGCAAATGTTCGAAGTCATGCGGCCGTGGCAACAAAGTACGTCAGCAG
ATACCAGCAAACACTTCGACGAAGCATGGAGAGCGATGCCACTTGCTTCAAATGGTGAAA
AAATGCCATGGACATAACTGTAGCTTTTTCCACGGGGAGGAAGGTTGTGTGTCAGACGAC
GGGCAGACGCATTACGATGAAAACGAATCATGGATATCGGAGGACTGTCTCACTTGTCGG
TGTGTCAACTCTGTGAAACAATGCGGTTTGGATTGTTCGAAACTTGGTTGCGAAGATCCT
AGTAACTACGATCGAGGCTGTTGCAGTTTGTGTGCCACCTTTTAA
| PANTHER |
Thrombospondin (IPR037349) - T[80-161] 1.2E-22 - T[167-221] 1.2E-22 - T[271-341] 1.2E-22 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[102-159] 8.943 - T[161-219] 10.572 - T[221-309] 8.579 |
| SMART |
VWF_dom (IPR001007) - T[104-158] 5.7E-5 - T[163-218] 1.3E-6 - T[223-308] 0.41 - T[456-511] 0.94 |
| Pfam |
VWF_dom (IPR001007) - T[109-158] 2.1E-6 - T[166-218] 7.6E-9 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[182-218] . - T[272-308] . |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[312-361] 2.7E-13 - T[392-442] 3.3E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[312-361] 2.22E-9 - T[394-447] 6.15E-7 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[313-367] 10.462 - T[395-448] 9.557 |
| SMART |
TSP1_rpt (IPR000884) - T[316-367] 1.0E-9 - T[398-448] 3.2E-5 |
| Pfam |
TSP1_rpt (IPR000884) - T[317-366] 5.8E-7 - T[401-447] 5.4E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CRIM1_HUMAN | 30.435 % | 93.6 | 5.42E-20 |